RNAquarium Metadata Server
Institute Website Terms of Use Privacy Policy

contig_metadata

5 rows where bioproject = "PRJNA340009" and tax_phylum = "Candidatus Adleribacteriota"

✎ View and edit SQL

This data as json, CSV (advanced)

tax_superkingdom 1

tax_phylum 1

  • Candidatus Adleribacteriota · 5 ✖

tax_clade 1

bioproject 1

  • PRJNA340009 · 5 ✖

analysis 1

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
26726163 26726163 PRJNA340009_P_NODE_80561_length_152_cov_5.456311_g80254_i0 PRJNA340009 80561 152 5.456311 8.29359272 Candidatus Adlerbacteria bacterium RIFCSPLOWO2_ 1932010 Bacteria Bacteria 58.9 1.23e-9   NR OGC87673.1 1797245 g80254 i0 72.2 0.710526315789474 36 10 71.1 0 150 43 58 93 OGC87673.1 MAG: hypothetical protein A2949_02120 [Candidatus Adlerbacteria bacterium RIFCSPLOWO2_01_FULL_54_21b] diamond 108 58.9 1 Bacteria Bacteria candidate phyla   Candidatus Adleribacteriota         Candidatus Adlerbacteria bacterium RIFCSPLOWO2_01_FULL_54_21b
28481542 28481542 PRJNA340009_P_NODE_59686_length_169_cov_7.191667_g59379_i0 PRJNA340009 59686 169 7.191667 12.15391723 Bacteria 2 Bacteria Bacteria 65.1 6.6e-11   NR KKW20703.1 1618608 g59379 i0 82.4 7.8284023668639104 34 6 60.4 0 167 66 183 216 KKW20703.1 MAG: tRNA (guanine-N(1)-)-methyltransferase [Candidatus Adlerbacteria bacterium GW2011_GWC1_50_9] diamond 1323 65.1 1 Bacteria Bacteria candidate phyla   Candidatus Adleribacteriota         Candidatus Adlerbacteria bacterium GW2011_GWC1_50_9
29365671 29365671 PRJNA340009_P_NODE_77969_length_159_cov_6.609091_g77662_i0 PRJNA340009 77969 159 6.609091 10.50845469 Bacteria 2 Bacteria Bacteria 48.5 3.93e-5   NR OGC84356.1 1797242 g77662 i0 71.4 1.22641509433962 35 10 66 0 115 11 112 146 OGC84356.1 MAG: ATP synthase F0 subunit B [Candidatus Adlerbacteria bacterium RIFCSPHIGHO2_12_FULL_53_18] diamond 195 48.5 1 Bacteria Bacteria candidate phyla   Candidatus Adleribacteriota         Candidatus Adlerbacteria bacterium RIFCSPHIGHO2_12_FULL_53_18
30106234 30106234 PRJNA340009_P_NODE_71292_length_163_cov_0.894737_g70985_i0 PRJNA340009 71292 163 0.894737 1.45842131 Candidatus Adlerbacteria bacterium 1932010 Bacteria Bacteria 55.5 3.93e-7   NR MEI6864037.1 1932010 g70985 i0 42.3 0.957055214723926 52 30 95.7 0 158 3 303 354 MEI6864037.1 serine protease [Candidatus Adlerbacteria bacterium] diamond 156 55.5 1 Bacteria Bacteria candidate phyla   Candidatus Adleribacteriota         Candidatus Adlerbacteria bacterium
31134273 31134273 PRJNA340009_P_NODE_68015_length_164_cov_3.443478_g67708_i0 PRJNA340009 68015 164 3.443478 5.64730392 Bacteria 2 Bacteria Bacteria 61.2 1.75e-9   NR OGC84421.1 1797242 g67708 i0 79.3 2.1219512195122 29 6 53 0 154 68 196 224 OGC84421.1 MAG: hypothetical protein A3F55_00375 [Candidatus Adlerbacteria bacterium RIFCSPHIGHO2_12_FULL_53_18] diamond 348 61.2 1 Bacteria Bacteria candidate phyla   Candidatus Adleribacteriota         Candidatus Adlerbacteria bacterium RIFCSPHIGHO2_12_FULL_53_18

Advanced export

JSON shape: default, array, newline-delimited

CSV options: 

CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;