RNAquarium Metadata Server
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contig_metadata

12 rows where bioproject = "PRJNA340009", tax_kingdom = "Shotokuvirae" and tax_phylum = "Cossaviricota"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Cossaviricota · 12 ✖

tax_kingdom 1

  • Shotokuvirae · 12 ✖

bioproject 1

  • PRJNA340009 · 12 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
6769607 6769607 PRJNA340009_P_NODE_24646_length_247_cov_2.161616_g24339_i0 PRJNA340009 24646 247 2.161616 5.33919152 Parvoviridae sp. 1940570 Viruses Viruses 134 1.06e-35   NR XNT21000.1 1940570 g24339 i0 74.4 3.98380566801619 82 20 99.6 1 2 247 229 309 XNT21000.1 MAG: replication protein [Parvoviridae sp.] diamond 984 134 1 Viruses   Shotokuvirae Cossaviricota Quintoviricetes Piccovirales Parvoviridae   Parvoviridae sp.
8045682 8045682 PRJNA340009_P_NODE_62047_length_167_cov_0.864407_g61740_i0 PRJNA340009 62047 167 0.864407 1.44355969 Protoambidensovirus incertum3 3431910 Viruses Viruses 167 4.79e-37   NTclustered gi|2742831367|gb|PP793395.1| 2050976 g61740 i0 88.489 3.65868263473054 139 15 83 1 9 146 497 359 MAG: Ambidensovirus sp. isolate 136_3958, partial genome blastn 611 167 1 Viruses   Shotokuvirae Cossaviricota Quintoviricetes Piccovirales Parvoviridae Protoambidensovirus Protoambidensovirus incertum3
9319852 9319852 PRJNA340009_P_NODE_12328_length_332_cov_1.862191_g12021_i0 PRJNA340009 12328 332 1.862191 6.18247412 Parvoviridae sp. 1940570 Viruses Viruses 603 6.889999999999997e-168   NTclustered gi|2413975755|gb|OP933681.1| 1940570 g12021 i0 99.398 1.54518072289157 332 2 100 0 1 332 1462 1131 MAG: Parvoviridae sp. isolate fi099par3 replication protein and capsid protein genes, complete cds blastn 513 603 1 Viruses   Shotokuvirae Cossaviricota Quintoviricetes Piccovirales Parvoviridae   Parvoviridae sp.
9320299 9320299 PRJNA340009_P_NODE_48328_length_186_cov_1.489051_g48021_i0 PRJNA340009 48328 186 1.489051 2.76963486 Parvoviridae sp. 1940570 Viruses Viruses 339 1.0899999999999998e-88   NTclustered gi|2413975755|gb|OP933681.1| 1940570 g48021 i0 99.462 1 186 1 100 0 1 186 3309 3124 MAG: Parvoviridae sp. isolate fi099par3 replication protein and capsid protein genes, complete cds blastn 186 339 1 Viruses   Shotokuvirae Cossaviricota Quintoviricetes Piccovirales Parvoviridae   Parvoviridae sp.
9320417 9320417 PRJNA340009_P_NODE_58888_length_171_cov_0.909836_g58581_i0 PRJNA340009 58888 171 0.909836 1.55581956 Betapolyomavirus macacae 1891767 Viruses Viruses 159 8.199999999999998e-35   NTclustered gi|156598992|gb|EF579658.1| 1891767 g58581 i0 86.755 0.883040935672515 151 11 88 4 11 161 2675 2534 Simian virus 40 isolate SV40(Ad)191, complete genome blastn 151 159 1 Viruses   Shotokuvirae Cossaviricota Papovaviricetes Sepolyvirales Polyomaviridae Betapolyomavirus Betapolyomavirus macacae
9998110 9998110 PRJNA340009_P_NODE_23448_length_252_cov_2.093596_g23141_i0 PRJNA340009 23448 252 2.093596 5.27586192 Betapolyomavirus macacae 1891767 Viruses Viruses 65.9 2.9e-10   NR AAK29054.1 1891767 g23141 i0 72.7 0.523809523809524 44 12 52.4 0 188 57 494 537 AAK29054.1 truncated large tumor antigen [Betapolyomavirus macacae] diamond 132 65.9 1 Viruses   Shotokuvirae Cossaviricota Papovaviricetes Sepolyvirales Polyomaviridae Betapolyomavirus Betapolyomavirus macacae
10596000 10596000 PRJNA340009_P_NODE_50009_length_183_cov_3.455224_g49702_i0 PRJNA340009 50009 183 3.455224 6.32305992 Parvoviridae sp. 1940570 Viruses Viruses 333 4.97e-87   NTclustered gi|2413975755|gb|OP933681.1| 1940570 g49702 i0 99.454 1 183 1 100 0 1 183 2116 1934 MAG: Parvoviridae sp. isolate fi099par3 replication protein and capsid protein genes, complete cds blastn 183 333 1 Viruses   Shotokuvirae Cossaviricota Quintoviricetes Piccovirales Parvoviridae   Parvoviridae sp.
15694619 15694619 PRJNA340009_P_NODE_23073_length_254_cov_1.292683_g22766_i0 PRJNA340009 23073 254 1.292683 3.28341482 Parvoviridae sp. 1940570 Viruses Viruses 355 1.57e-93   NTclustered gi|2413975755|gb|OP933681.1| 1940570 g22766 i0 95.111 0.885826771653543 225 11 89 0 30 254 2538 2314 MAG: Parvoviridae sp. isolate fi099par3 replication protein and capsid protein genes, complete cds blastn 225 355 1 Viruses   Shotokuvirae Cossaviricota Quintoviricetes Piccovirales Parvoviridae   Parvoviridae sp.
22068310 22068310 PRJNA340009_P_NODE_13378_length_321_cov_1.547794_g13071_i0 PRJNA340009 13378 321 1.547794 4.96841874 Parvoviridae sp. 1940570 Viruses Viruses 390 5.62e-104   NTclustered gi|2413975755|gb|OP933681.1| 1940570 g13071 i0 99.078 1.03738317757009 217 2 100 0 1 217 654 870 MAG: Parvoviridae sp. isolate fi099par3 replication protein and capsid protein genes, complete cds blastn 333 390 1 Viruses   Shotokuvirae Cossaviricota Quintoviricetes Piccovirales Parvoviridae   Parvoviridae sp.
23344544 23344544 PRJNA340009_P_NODE_7999_length_396_cov_2.512968_g7692_i0 PRJNA340009 7999 396 2.512968 9.95135328 Parvoviridae sp. 1940570 Viruses Viruses 676 0   NTclustered gi|2413975755|gb|OP933681.1| 1940570 g7692 i0 97.475 1 396 10 100 0 1 396 3110 2715 MAG: Parvoviridae sp. isolate fi099par3 replication protein and capsid protein genes, complete cds blastn 396 676 1 Viruses   Shotokuvirae Cossaviricota Quintoviricetes Piccovirales Parvoviridae   Parvoviridae sp.
28401162 28401162 PRJNA340009_P_NODE_63946_length_166_cov_1.470085_g63639_i0 PRJNA340009 63946 166 1.470085 2.4403411 Luscinia sibilans parvo-like hybrid virus 2794515 Viruses Viruses 95.9 1.14e-21   NR QTE03982.1 2794515 g63639 i0 94.4 0.975903614457831 54 3 97.6 0 3 164 141 194 QTE03982.1 MAG: replication protein [Luscinia sibilans parvo-like hybrid virus] diamond 162 95.9 1 Viruses   Shotokuvirae Cossaviricota Quintoviricetes Piccovirales Parvoviridae   Luscinia sibilans parvo-like hybrid virus
31844618 31844618 PRJNA340009_P_NODE_33457_length_217_cov_1.285714_g33150_i0 PRJNA340009 33457 217 1.285714 2.78999938 Luscinia sibilans parvo-like hybrid virus 2794515 Viruses Viruses 117 1.47e-29   NR QTE03982.1 2794515 g33150 i0 88.3 0.829493087557604 60 7 82.9 0 212 33 335 394 QTE03982.1 MAG: replication protein [Luscinia sibilans parvo-like hybrid virus] diamond 180 117 1 Viruses   Shotokuvirae Cossaviricota Quintoviricetes Piccovirales Parvoviridae   Luscinia sibilans parvo-like hybrid virus

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;