RNAquarium Metadata Server
Institute Website Terms of Use Privacy Policy

contig_metadata

3 rows where bioproject = "PRJNA340009", tax_kingdom = "Promethearchaeati" and tax_phylum = "Promethearchaeota"

✎ View and edit SQL

This data as json, CSV (advanced)

tax_superkingdom 1

tax_phylum 1

  • Promethearchaeota · 3 ✖

tax_kingdom 1

  • Promethearchaeati · 3 ✖

bioproject 1

  • PRJNA340009 · 3 ✖

analysis 1

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
29159070 29159070 PRJNA340009_P_NODE_14029_length_314_cov_8.539623_g13722_i0 PRJNA340009 14029 314 8.539623 26.81441622 Promethearchaeia archaeon 3067280 Archaea Archaea 52.4 7.51e-6   NR MEE9379621.1 3067280 g13722 i0 35.6 0.993630573248408 104 54 86.9 3 289 17 33 136 MEE9379621.1 hypothetical protein [Promethearchaeia archaeon] diamond 312 52.4 1 Archaea   Promethearchaeati Promethearchaeota Promethearchaeia       Promethearchaeia archaeon
31908034 31908034 PRJNA340009_P_NODE_76957_length_161_cov_0.910714_g76650_i0 PRJNA340009 76957 161 0.910714 1.46624954 Promethearchaeota archaeon 2053489 Archaea Archaea 65.1 3.77e-12   NR MBD3197985.1 2053489 g76650 i0 55.8 0.968944099378882 52 22 96.9 1 161 6 29 79 MBD3197985.1 hypothetical protein [Promethearchaeota archaeon] diamond 156 65.1 1 Archaea   Promethearchaeati Promethearchaeota         Promethearchaeota archaeon
32129676 32129676 PRJNA340009_P_NODE_18498_length_279_cov_3.391304_g18191_i0 PRJNA340009 18498 279 3.391304 9.46173816 Promethearchaeota archaeon 2053489 Archaea Archaea 102 8.0699999999999994e-23   NR MBY9010503.1 2053489 g18191 i0 52.7 2.97849462365591 93 43 98.9 1 278 3 406 498 MBY9010503.1 thioredoxin domain-containing protein [Promethearchaeota archaeon] diamond 831 102 1 Archaea   Promethearchaeati Promethearchaeota         Promethearchaeota archaeon

Advanced export

JSON shape: default, array, newline-delimited

CSV options: 

CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;