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contig_metadata

16 rows where bioproject = "PRJNA340009", tax_kingdom = "Bacillati" and tax_phylum = "Armatimonadota"

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tax_superkingdom 1

tax_phylum 1

  • Armatimonadota · 16 ✖

tax_kingdom 1

  • Bacillati · 16 ✖

bioproject 1

  • PRJNA340009 · 16 ✖

analysis 1

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
26758101 26758101 PRJNA340009_P_NODE_69201_length_164_cov_0.886957_g68894_i0 PRJNA340009 69201 164 0.886957 1.45460948 Armatimonadia bacterium 2663015 Bacteria Bacteria 52.8 3.69e-6   NR MEN6345652.1 2663015 g68894 i0 57.4 0.859756097560976 47 20 86 0 164 24 103 149 MEN6345652.1 DNA polymerase [Armatimonadia bacterium] diamond 141 52.8 1 Bacteria   Bacillati Armatimonadota Armatimonadia       Armatimonadia bacterium
27200936 27200936 PRJNA340009_P_NODE_30102_length_227_cov_1.089888_g29795_i0 PRJNA340009 30102 227 1.089888 2.47404576 Fimbriimonadaceae bacterium 2682144 Bacteria Bacteria 60.8 1.23e-8   NR HMS54623.1 2682144 g29795 i0 45.1 0.9383259911894268 71 39 93.8 0 13 225 178 248 HMS54623.1 hypothetical protein [Fimbriimonadaceae bacterium] diamond 213 60.8 1 Bacteria   Bacillati Armatimonadota Fimbriimonadia Fimbriimonadales Fimbriimonadaceae   Fimbriimonadaceae bacterium
28022434 28022434 PRJNA340009_P_NODE_57545_length_172_cov_3.235772_g57238_i0 PRJNA340009 57545 172 3.235772 5.56552784 Armatimonadota bacterium 2033014 Bacteria Bacteria 71.2 1.28e-12   NR MCL5103234.1 2033014 g57238 i0 59.6 0.906976744186046 52 21 90.7 0 162 7 53 104 MCL5103234.1 YCF48-related protein [Armatimonadota bacterium] diamond 156 71.2 1 Bacteria   Bacillati Armatimonadota         Armatimonadota bacterium
28102499 28102499 PRJNA340009_P_NODE_62785_length_167_cov_0.864407_g62478_i0 PRJNA340009 62785 167 0.864407 1.44355969 PVC group 1783257 Bacteria Bacteria 58.9 2.59e-8   NR HET6455087.1 2033014 g62478 i0 50.9 1.94011976047904 55 27 98.8 0 166 2 897 951 HET6455087.1 LAGLIDADG family homing endonuclease [Armatimonadota bacterium] diamond 324 59.3 0.993254637436762 Bacteria   Bacillati Armatimonadota         Armatimonadota bacterium
28116877 28116877 PRJNA340009_P_NODE_45305_length_191_cov_1.091549_g44998_i0 PRJNA340009 45305 191 1.091549 2.08485859 Armatimonadota bacterium 2033014 Bacteria Bacteria 92.4 2.28e-20   NR MEI7986571.1 2033014 g44998 i0 84.3 0.801047120418848 51 8 80.1 0 33 185 206 256 MEI7986571.1 hypothetical protein [Armatimonadota bacterium] diamond 153 92.4 1 Bacteria   Bacillati Armatimonadota         Armatimonadota bacterium
28432809 28432809 PRJNA340009_P_NODE_68646_length_164_cov_1.295652_g68339_i0 PRJNA340009 68646 164 1.295652 2.12486928 Chthonomonadaceae bacterium 2739509 Bacteria Bacteria 107 1.44e-26   NR HZP80981.1 2739509 g68339 i0 87 2.96341463414634 54 7 98.8 0 164 3 108 161 HZP80981.1 site-specific DNA-methyltransferase [Chthonomonadaceae bacterium] diamond 486 107 1 Bacteria   Bacillati Armatimonadota Chthonomonadia Chthonomonadales Chthonomonadaceae   Chthonomonadaceae bacterium
28559173 28559173 PRJNA340009_P_NODE_20627_length_266_cov_4.230415_g20320_i0 PRJNA340009 20627 266 4.230415 11.2529039 Armatimonadota bacterium 2033014 Bacteria Bacteria 104 2.7300000000000003e-26   NR RJP46390.1 2033014 g20320 i0 69.2 1.7593984962406 78 24 88 0 1 234 70 147 RJP46390.1 MAG: transcriptional repressor NrdR [Armatimonadota bacterium] diamond 468 104 1 Bacteria   Bacillati Armatimonadota         Armatimonadota bacterium
29348461 29348461 PRJNA340009_P_NODE_29829_length_228_cov_0.949721_g29522_i0 PRJNA340009 29829 228 0.949721 2.16536388 Fimbriimonadales bacterium 2682145 Bacteria Bacteria 95.9 1.39e-21   NR MFN8218924.1 2682145 g29522 i0 60 0.986842105263158 75 30 98.7 0 226 2 159 233 MFN8218924.1 PKD domain-containing protein [Fimbriimonadales bacterium] diamond 225 95.9 1 Bacteria   Bacillati Armatimonadota Fimbriimonadia Fimbriimonadales     Fimbriimonadales bacterium
29821696 29821696 PRJNA340009_P_NODE_10511_length_355_cov_0.941176_g10204_i0 PRJNA340009 10511 355 0.941176 3.3411748 Chthonomonadales bacterium 2282151 Bacteria Bacteria 108 4.93e-25   NR MCC6728777.1 2282151 g10204 i0 40.5 1.96056338028169 116 69 98 0 351 4 91 206 MCC6728777.1 beta-galactosidase [Chthonomonadales bacterium] diamond 696 108 1 Bacteria   Bacillati Armatimonadota Chthonomonadia Chthonomonadales     Chthonomonadales bacterium
29885349 29885349 PRJNA340009_P_NODE_76311_length_161_cov_0.910714_g76004_i0 PRJNA340009 76311 161 0.910714 1.46624954 Fimbriimonadales bacterium 2682145 Bacteria Bacteria 109 6.1500000000000005e-27   NR MFI5387856.1 2682145 g76004 i0 88.7 5.92546583850932 53 6 98.8 0 2 160 91 143 MFI5387856.1 M14 family zinc carboxypeptidase [Fimbriimonadales bacterium] diamond 954 109 1 Bacteria   Bacillati Armatimonadota Fimbriimonadia Fimbriimonadales     Fimbriimonadales bacterium
30106223 30106223 PRJNA340009_P_NODE_65252_length_166_cov_0.871795_g64945_i0 PRJNA340009 65252 166 0.871795 1.4471797 Armatimonas sp. 1872638 Bacteria Bacteria 96.3 1.5600000000000002e-21   NR WP_309714263.1 1872638 g64945 i0 88.5 0.939759036144578 52 6 94 0 1 156 164 215 WP_309714263.1 nucleoside triphosphate pyrophosphohydrolase [Armatimonas sp.] diamond 156 96.3 1 Bacteria   Bacillati Armatimonadota Armatimonadia Armatimonadales Armatimonadaceae Armatimonas Armatimonas sp.
30896372 30896372 PRJNA340009_P_NODE_70614_length_163_cov_1.789474_g70307_i0 PRJNA340009 70614 163 1.789474 2.91684262 Fimbriimonadales bacterium 2682145 Bacteria Bacteria 51.2 9.45e-6   NR GIV03791.1 2682145 g70307 i0 54.7 0.975460122699387 53 19 97.5 2 163 5 131 178 GIV03791.1 MAG: hypothetical protein KatS3mg015_2621 [Fimbriimonadales bacterium] diamond 159 51.2 1 Bacteria   Bacillati Armatimonadota Fimbriimonadia Fimbriimonadales     Fimbriimonadales bacterium
31148518 31148518 PRJNA340009_P_NODE_45995_length_189_cov_8.464286_g45688_i0 PRJNA340009 45995 189 8.464286 15.99750054 Armatimonadota bacterium 2033014 Bacteria Bacteria 91.3 3.9e-21   NR MBC8103923.1 2033014 g45688 i0 64.8 0.857142857142857 54 19 85.7 0 1 162 134 187 MBC8103923.1 metallophosphoesterase family protein [Armatimonadota bacterium] diamond 162 91.3 1 Bacteria   Bacillati Armatimonadota         Armatimonadota bacterium
32161350 32161350 PRJNA340009_P_NODE_62998_length_167_cov_0.864407_g62691_i0 PRJNA340009 62998 167 0.864407 1.44355969 Armatimonadota bacterium 2033014 Bacteria Bacteria 50.8 1.27e-6   NR MCL6531725.1 2033014 g62691 i0 50 1.56287425149701 46 23 82.6 0 160 23 19 64 MCL6531725.1 hypothetical protein [Armatimonadota bacterium] diamond 261 50.8 1 Bacteria   Bacillati Armatimonadota         Armatimonadota bacterium
32382608 32382608 PRJNA340009_P_NODE_12319_length_332_cov_2.551237_g12012_i0 PRJNA340009 12319 332 2.551237 8.47010684 Armatimonadota bacterium 2033014 Bacteria Bacteria 90.9 2e-19   NR MBI3926410.1 2033014 g12012 i0 47.5 0.72289156626506 80 42 72.3 0 92 331 129 208 MBI3926410.1 rhomboid family intramembrane serine protease [Armatimonadota bacterium] diamond 240 90.9 1 Bacteria   Bacillati Armatimonadota         Armatimonadota bacterium
32761320 32761320 PRJNA340009_P_NODE_32860_length_218_cov_46.461538_g32553_i0 PRJNA340009 32860 218 46.461538 101.28615284 Armatimonas sp. 1872638 Bacteria Bacteria 80.9 9.11e-16   NR WP_395091519.1 1872638 g32553 i0 57.4 0.935779816513762 68 29 93.6 0 208 5 56 123 WP_395091519.1 hypothetical protein [Armatimonas sp.] diamond 204 80.9 1 Bacteria   Bacillati Armatimonadota Armatimonadia Armatimonadales Armatimonadaceae Armatimonas Armatimonas sp.

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;