contig_metadata
11 rows where bioproject = "PRJNA340009", tax_clade = "delta/epsilon subdivisions" and tax_superkingdom = "Bacteria"
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| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 22068819 | 22068819 | PRJNA340009_P_NODE_54978_length_176_cov_1.566929_g54671_i0 | PRJNA340009 | 54978 | 176 | 1.566929 | 2.75779504 | uncultured delta proteobacterium | 34034 | Bacteria | Bacteria | 52.8 | 0.015 | NTclustered | gi|2874254016|emb|OY970341.1| | 34034 | g54671 | i0 | 100 | 0.159090909090909 | 28 | 0 | 16 | 0 | 5 | 32 | 3987185 | 3987158 | MAG: uncultured delta proteobacterium isolate MFD01231.bin.c.2 genome assembly, chromosome: 1 | blastn | 28 | 52.8 | 1 | Bacteria | delta/epsilon subdivisions | Deltaproteobacteria | uncultured delta proteobacterium | ||||||
| 29113091 | 29113091 | PRJNA340009_P_NODE_20968_length_264_cov_12.023256_g20661_i0 | PRJNA340009 | 20968 | 264 | 12.023256 | 31.74139584 | Bacteria | 2 | Bacteria | Bacteria | 68.6 | 2.71e-11 | NR | OGQ18306.1 | 1797858 | g20661 | i0 | 64.6 | 2.72727272727273 | 48 | 17 | 54.5 | 0 | 146 | 3 | 3 | 50 | OGQ18306.1 MAG: epimerase [Deltaproteobacteria bacterium RIFCSPHIGHO2_02_FULL_40_11] | diamond | 720 | 68.9 | 0.995645863570392 | Bacteria | delta/epsilon subdivisions | Deltaproteobacteria | Deltaproteobacteria bacterium RIFCSPHIGHO2_02_FULL_40_11 | ||||||
| 29411454 | 29411454 | PRJNA340009_P_NODE_62589_length_167_cov_0.864407_g62282_i0 | PRJNA340009 | 62589 | 167 | 0.864407 | 1.44355969 | Deltaproteobacteria bacterium ADurb.Bin135 | 1852867 | Bacteria | Bacteria | 70.1 | 2.98e-12 | NR | OQB75650.1 | 1852867 | g62282 | i0 | 56.4 | 0.988023952095808 | 55 | 24 | 98.8 | 0 | 166 | 2 | 524 | 578 | OQB75650.1 MAG: hypothetical protein BWX92_02525 [Deltaproteobacteria bacterium ADurb.Bin135] | diamond | 165 | 70.1 | 1 | Bacteria | delta/epsilon subdivisions | Deltaproteobacteria | Deltaproteobacteria bacterium ADurb.Bin135 | ||||||
| 29649371 | 29649371 | PRJNA340009_P_NODE_65570_length_165_cov_7.482759_g65263_i0 | PRJNA340009 | 65570 | 165 | 7.482759 | 12.34655235 | Myxococcota | 2818505 | Bacteria | Bacteria | 112 | 1.09e-27 | NR | OGQ06909.1 | 1797859 | g65263 | i0 | 90.6 | 18.4363636363636 | 53 | 5 | 96.4 | 0 | 4 | 162 | 318 | 370 | OGQ06909.1 MAG: crotonyl-CoA carboxylase/reductase [Deltaproteobacteria bacterium RIFCSPHIGHO2_02_FULL_40_28] | diamond | 3042 | 113 | 0.991150442477876 | Bacteria | delta/epsilon subdivisions | Deltaproteobacteria | Deltaproteobacteria bacterium RIFCSPHIGHO2_02_FULL_40_28 | ||||||
| 30218259 | 30218259 | PRJNA340009_P_NODE_78692_length_157_cov_198.064815_g78385_i0 | PRJNA340009 | 78692 | 157 | 198.064815 | 310.96175955 | Myxococcota | 2818505 | Bacteria | Bacteria | 71.2 | 5.97e-13 | NR | PIR24599.1 | 1973973 | g78385 | i0 | 73.5 | 2.82802547770701 | 49 | 13 | 93.6 | 0 | 155 | 9 | 144 | 192 | PIR24599.1 MAG: RNA polymerase subunit sigma-70 [Deltaproteobacteria bacterium CG11_big_fil_rev_8_21_14_0_20_42_23] | diamond | 444 | 71.2 | 1 | Bacteria | delta/epsilon subdivisions | Deltaproteobacteria | Deltaproteobacteria bacterium CG11_big_fil_rev_8_21_14_0_20_42_23 | ||||||
| 30359541 | 30359541 | PRJNA340009_P_NODE_27292_length_236_cov_3.481283_g26985_i0 | PRJNA340009 | 27292 | 236 | 3.481283 | 8.21582788 | Deltaproteobacteria bacterium 21-66-5 | 1970506 | Bacteria | Bacteria | 63.5 | 9.64e-11 | NR | OYV74892.1 | 1970506 | g26985 | i0 | 66.7 | 1.14406779661017 | 48 | 16 | 61 | 0 | 3 | 146 | 70 | 117 | OYV74892.1 MAG: hypothetical protein B7Z74_01665 [Deltaproteobacteria bacterium 21-66-5] | diamond | 270 | 63.5 | 1 | Bacteria | delta/epsilon subdivisions | Deltaproteobacteria | Deltaproteobacteria bacterium 21-66-5 | ||||||
| 31085803 | 31085803 | PRJNA340009_P_NODE_49215_length_184_cov_44.288889_g48908_i0 | PRJNA340009 | 49215 | 184 | 44.288889 | 81.49155576 | Deltaproteobacteria bacterium HGW-Deltaproteobacteria-21 | 2013749 | Bacteria | Bacteria | 72.4 | 5.88e-13 | NR | PKN28324.1 | 2013749 | g48908 | i0 | 66.1 | 0.91304347826087 | 56 | 18 | 91.3 | 1 | 5 | 172 | 134 | 188 | PKN28324.1 MAG: biotin carboxylase [Deltaproteobacteria bacterium HGW-Deltaproteobacteria-21] | diamond | 168 | 72.4 | 1 | Bacteria | delta/epsilon subdivisions | Deltaproteobacteria | Deltaproteobacteria bacterium HGW-Deltaproteobacteria-21 | ||||||
| 31102852 | 31102852 | PRJNA340009_P_NODE_27315_length_236_cov_2.796791_g27008_i0 | PRJNA340009 | 27315 | 236 | 2.796791 | 6.60042676 | Thermotogota | 200918 | Bacteria | Bacteria | 42.7 | 0.0213 | NR | ADI18416.1 | 710836 | g27008 | i0 | 41.8 | 1.33474576271186 | 55 | 30 | 67.4 | 1 | 4 | 162 | 72 | 126 | ADI18416.1 hypothetical protein [uncultured delta proteobacterium HF4000_08N17] | diamond | 315 | 42.7 | 1 | Bacteria | delta/epsilon subdivisions | Deltaproteobacteria | uncultured delta proteobacterium HF4000_08N17 | ||||||
| 31117087 | 31117087 | PRJNA340009_P_NODE_49555_length_184_cov_1.814815_g49248_i0 | PRJNA340009 | 49555 | 184 | 1.814815 | 3.3392596 | SAR324 cluster bacterium | 2024889 | Bacteria | Bacteria | 43.5 | 0.0088 | NR | MEY8217475.1 | 2024889 | g49248 | i0 | 44.6 | 1.72826086956522 | 56 | 24 | 81.5 | 2 | 3 | 152 | 81 | 135 | MEY8217475.1 DUF3987 domain-containing protein [SAR324 cluster bacterium] | diamond | 318 | 43.5 | 1 | Bacteria | delta/epsilon subdivisions | Deltaproteobacteria | SAR324 cluster bacterium | ||||||
| 31148556 | 31148556 | PRJNA340009_P_NODE_76835_length_161_cov_0.910714_g76528_i0 | PRJNA340009 | 76835 | 161 | 0.910714 | 1.46624954 | Deltaproteobacteria bacterium RBG_16_55_12 | 1797844 | Bacteria | Bacteria | 70.5 | 1.55e-12 | NR | OGP99209.1 | 1797844 | g76528 | i0 | 90 | 0.745341614906832 | 40 | 4 | 74.5 | 0 | 3 | 122 | 300 | 339 | OGP99209.1 MAG: hypothetical protein A2W10_09000 [Deltaproteobacteria bacterium RBG_16_55_12] | diamond | 120 | 70.5 | 1 | Bacteria | delta/epsilon subdivisions | Deltaproteobacteria | Deltaproteobacteria bacterium RBG_16_55_12 | ||||||
| 32887132 | 32887132 | PRJNA340009_P_NODE_35560_length_211_cov_3.456790_g35253_i0 | PRJNA340009 | 35560 | 211 | 3.45679 | 7.2938269 | Deltaproteobacteria bacterium CG11_big_fil_rev_8_21_14_ | 2026735 | Bacteria | Bacteria | 63.2 | 1.27e-9 | NR | PIR23695.1 | 1973974 | g35253 | i0 | 43.8 | 3.21327014218009 | 73 | 30 | 88.2 | 2 | 24 | 209 | 116 | 188 | PIR23695.1 MAG: hypothetical protein COV44_01335 [Deltaproteobacteria bacterium CG11_big_fil_rev_8_21_14_0_20_45_16] | diamond | 678 | 63.2 | 1 | Bacteria | delta/epsilon subdivisions | Deltaproteobacteria | Deltaproteobacteria bacterium CG11_big_fil_rev_8_21_14_0_20_45_16 |
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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;