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contig_metadata

21 rows where bioproject = "PRJNA340009", tax_clade = "Stenosarchaea group" and tax_phylum = "Methanobacteriota"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Methanobacteriota · 21 ✖

tax_kingdom 1

tax_clade 1

  • Stenosarchaea group · 21 ✖

bioproject 1

  • PRJNA340009 · 21 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
2943288 2943288 PRJNA340009_P_NODE_8683_length_383_cov_5.353293_g8376_i0 PRJNA340009 8683 383 5.353293 20.50311219 Methanosarcina sp. MTP4 1434100 Archaea Archaea 56.5 0.003   NTclustered gi|805342629|gb|CP009505.1| 1434100 g8376 i0 100 0.0783289817232376 30 0 8 0 335 364 341886 341915 Methanosarcina sp. MTP4, complete genome blastn 30 56.5 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Methanomicrobia Methanosarcinales Methanosarcinaceae Methanosarcina Methanosarcina sp. MTP4
8045608 8045608 PRJNA340009_P_NODE_55447_length_175_cov_2.428571_g55140_i0 PRJNA340009 55447 175 2.428571 4.24999925 uncultured Methanoregula sp. 1005933 Archaea Archaea 182 1.8e-41   NTclustered gi|2621784703|emb|OY781161.1| 1005933 g55140 i0 86.585 0.9371428571428572 164 22 94 0 12 175 1002823 1002660 MAG: uncultured Methanoregula sp. isolate bdb6c56a-0f97-41a9-9319-40fe56c94967 genome assembly, chromosome: 1 blastn 164 182 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Methanomicrobia Methanomicrobiales Methanoregulaceae Methanoregula uncultured Methanoregula sp.
26807163 26807163 PRJNA340009_P_NODE_63181_length_167_cov_0.864407_g62874_i0 PRJNA340009 63181 167 0.864407 1.44355969 Methanoregula 395331 Archaea Archaea 87 1.71e-18   NR WP_320161339.1 1005933 g62874 i0 69.1 4.94011976047904 55 17 98.8 0 167 3 290 344 WP_320161339.1 non-hydrolyzing UDP-N-acetylglucosamine 2-epimerase [uncultured Methanoregula sp.] diamond 825 87 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Methanomicrobia Methanomicrobiales Methanoregulaceae Methanoregula uncultured Methanoregula sp.
26821688 26821688 PRJNA340009_P_NODE_16341_length_295_cov_1.239837_g16034_i0 PRJNA340009 16341 295 1.239837 3.65751915 Methanogenium sp. 2196 Archaea Archaea 49.3 3.49e-4   NR MFA5398661.1 2196 g16034 i0 36.9 0.854237288135593 84 41 78.3 3 240 10 98 176 MFA5398661.1 hypothetical protein [Methanogenium sp.] diamond 252 49.3 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Methanomicrobia Methanomicrobiales Methanomicrobiaceae Methanogenium Methanogenium sp.
26948060 26948060 PRJNA340009_P_NODE_66722_length_165_cov_0.879310_g66415_i0 PRJNA340009 66722 165 0.87931 1.4508615 Methanoculleus sp. 90427 Archaea Archaea 56.2 1.54e-7   NR WP_292561174.1 90427 g66415 i0 48.2 1.01818181818182 56 28 100 1 1 165 172 227 WP_292561174.1 hypothetical protein [Methanoculleus sp.] diamond 168 56.2 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Methanomicrobia Methanomicrobiales Methanomicrobiaceae Methanoculleus Methanoculleus sp.
27011374 27011374 PRJNA340009_P_NODE_76642_length_161_cov_0.910714_g76335_i0 PRJNA340009 76642 161 0.910714 1.46624954 Methanosarcina sp. 2213 Archaea Archaea 41.6 0.0317   NR HET8688143.1 2213 g76335 i0 48.8 0.801242236024845 43 22 80.1 0 3 131 189 231 HET8688143.1 hypothetical protein [Methanosarcina sp.] diamond 129 41.6 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Methanomicrobia Methanosarcinales Methanosarcinaceae Methanosarcina Methanosarcina sp.
27359383 27359383 PRJNA340009_P_NODE_72263_length_163_cov_0.894737_g71956_i0 PRJNA340009 72263 163 0.894737 1.45842131 Salinigranum salinum 1364937 Archaea Archaea 41.2 0.0453   NR WP_204959945.1 1364937 g71956 i0 39.5 0.699386503067485 38 23 69.9 0 124 11 47 84 WP_204959945.1 helix-hairpin-helix domain-containing protein [Salinigranum salinum] diamond 114 41.2 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Halobacteria Halobacteriales Haloferacaceae Salinigranum Salinigranum salinum
28338039 28338039 PRJNA340009_P_NODE_22286_length_258_cov_1.248804_g21979_i0 PRJNA340009 22286 258 1.248804 3.22191432 Candidatus Methanoperedens sp. 2032688 Archaea Archaea 127 2.38e-34   NR MCX9026283.1 2032688 g21979 i0 64.3 0.976744186046512 84 30 97.7 0 256 5 132 215 MCX9026283.1 GNAT family N-acetyltransferase [Candidatus Methanoperedens sp.] diamond 252 127 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Methanomicrobia Methanosarcinales Candidatus Methanoperedentaceae Candidatus Methanoperedens Candidatus Methanoperedens sp.
29176343 29176343 PRJNA340009_P_NODE_43629_length_194_cov_1.406897_g43322_i0 PRJNA340009 43629 194 1.406897 2.72938018 Stenosarchaea group 2290931 Archaea Archaea 53.9 2.18e-6   NR WP_054519926.1 1604004 g43322 i0 47.5 1.80927835051546 59 31 91.2 0 2 178 98 156 WP_054519926.1 DNA methyltransferase [Halanaeroarchaeum sulfurireducens] diamond 351 54.3 0.992633517495396 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Halobacteria Halobacteriales Halobacteriaceae Halanaeroarchaeum Halanaeroarchaeum sulfurireducens
29253423 29253423 PRJNA340009_P_NODE_69989_length_164_cov_0.886957_g69682_i0 PRJNA340009 69989 164 0.886957 1.45460948 Methanosarcina sp. 2213 Archaea Archaea 83.6 4.16e-17   NR HET8686749.1 2213 g69682 i0 71.7 1.9390243902439 53 15 97 0 164 6 183 235 HET8686749.1 ribonucleotide reductase N-terminal alpha domain-containing protein [Methanosarcina sp.] diamond 318 83.6 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Methanomicrobia Methanosarcinales Methanosarcinaceae Methanosarcina Methanosarcina sp.
29348467 29348467 PRJNA340009_P_NODE_38429_length_205_cov_1.108974_g38122_i0 PRJNA340009 38429 205 1.108974 2.2733967 Methanosarcina sp. 2213 Archaea Archaea 119 2.86e-29   NR HET8689276.1 2213 g38122 i0 74.6 0.980487804878049 67 17 98 0 203 3 292 358 HET8689276.1 DNA polymerase [Methanosarcina sp.] diamond 201 119 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Methanomicrobia Methanosarcinales Methanosarcinaceae Methanosarcina Methanosarcina sp.
29348507 29348507 PRJNA340009_P_NODE_74969_length_162_cov_0.902655_g74662_i0 PRJNA340009 74969 162 0.902655 1.4623011 Methanogenium sp. 2196 Archaea Archaea 53.9 1.44e-6   NR MFA5394632.1 2196 g74662 i0 60 0.740740740740741 40 16 74.1 0 40 159 24 63 MFA5394632.1 lytic transglycosylase domain-containing protein [Methanogenium sp.] diamond 120 53.9 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Methanomicrobia Methanomicrobiales Methanomicrobiaceae Methanogenium Methanogenium sp.
29411460 29411460 PRJNA340009_P_NODE_66889_length_165_cov_0.879310_g66582_i0 PRJNA340009 66889 165 0.87931 1.4508615 Methanoregula sp. 2052170 Archaea Archaea 47 4.12e-5   NR MCK9593839.1 2052170 g66582 i0 46.2 0.709090909090909 39 21 70.9 0 163 47 31 69 MCK9593839.1 hypothetical protein [Methanoregula sp.] diamond 117 47 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Methanomicrobia Methanomicrobiales Methanoregulaceae Methanoregula Methanoregula sp.
29506184 29506184 PRJNA340009_P_NODE_79430_length_155_cov_15.962264_g79123_i0 PRJNA340009 79430 155 15.962264 24.7415092 Candidatus Methanofastidiosia archaeon 2099674 Archaea Archaea 43.1 0.00807   NR MFQ5891455.1 2099674 g79123 i0 55.9 1.47096774193548 34 11 58.1 1 66 155 69 102 MFQ5891455.1 endonuclease domain-containing protein [Candidatus Methanofastidiosia archaeon] diamond 228 43.1 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Candidatus Methanofastidiosia       Candidatus Methanofastidiosia archaeon
30801270 30801270 PRJNA340009_P_NODE_25134_length_245_cov_2.341837_g24827_i0 PRJNA340009 25134 245 2.341837 5.73750065 Methanoculleus sp. 90427 Archaea Archaea 138 1.86e-39   NR WP_292561629.1 90427 g24827 i0 78.5 0.96734693877551 79 17 96.7 0 2 238 82 160 WP_292561629.1 MT-A70 family methyltransferase [Methanoculleus sp.] diamond 237 138 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Methanomicrobia Methanomicrobiales Methanomicrobiaceae Methanoculleus Methanoculleus sp.
31008247 31008247 PRJNA340009_P_NODE_60794_length_168_cov_1.714286_g60487_i0 PRJNA340009 60794 168 1.714286 2.88000048 Halobacteriales 2235 Archaea Archaea 50.8 1.94e-5   NR WP_121744814.1 1702106 g60487 i0 44.6 5 56 31 100 0 1 168 107 162 WP_121744814.1 BREX-1 system adenine-specific DNA-methyltransferase PglX [Natronorubrum halophilum] diamond 840 50.8 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Halobacteria Halobacteriales Natrialbaceae Natronorubrum Natronorubrum halophilum
31402116 31402116 PRJNA340009_P_NODE_50856_length_182_cov_1.533835_g50549_i0 PRJNA340009 50856 182 1.533835 2.7915797 Methanosarcina sp. DH1 2605695 Archaea Archaea 40.8 0.0397   NR WP_229393533.1 2605695 g50549 i0 57.6 0.543956043956044 33 14 54.4 0 138 40 13 45 WP_229393533.1 SET domain-containing protein [Methanosarcina sp. DH1] diamond 99 40.8 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Methanomicrobia Methanosarcinales Methanosarcinaceae Methanosarcina Methanosarcina sp. DH1
32066112 32066112 PRJNA340009_P_NODE_35458_length_211_cov_10.308642_g35151_i0 PRJNA340009 35458 211 10.308642 21.75123462 Methanothrix sp. 90426 Archaea Archaea 82.4 2.53e-16   NR WP_214083743.1 90426 g35151 i0 55.1 1.91943127962085 69 31 98.1 0 3 209 293 361 WP_214083743.1 SBBP repeat-containing protein [Methanothrix sp.] diamond 405 82.4 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Methanomicrobia Methanotrichales Methanotrichaceae Methanothrix Methanothrix sp.
32305268 32305268 PRJNA340009_P_NODE_71659_length_163_cov_0.894737_g71352_i0 PRJNA340009 71659 163 0.894737 1.45842131 root 1 Root_unresolved Root_unresolved 97.1 9.51e-22   NR WP_091934339.1 487685 g71352 i0 81.5 2.98159509202454 54 10 99.4 0 162 1 30 83 WP_091934339.1 ATP-binding protein [Methanolobus profundi] diamond 486 97.4 0.996919917864476 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Methanomicrobia Methanosarcinales Methanosarcinaceae Methanolobus Methanolobus profundi
32319730 32319730 PRJNA340009_P_NODE_73799_length_162_cov_0.902655_g73492_i0 PRJNA340009 73799 162 0.902655 1.4623011 Methanoregulaceae archaeon 2485498 Archaea Archaea 48.9 7.54e-5   NR HPD11387.1 2485498 g73492 i0 69 0.537037037037037 29 9 53.7 0 89 3 1 29 HPD11387.1 hypothetical protein [Methanoregulaceae archaeon] diamond 87 48.9 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Methanomicrobia Methanomicrobiales Methanoregulaceae   Methanoregulaceae archaeon
32446167 32446167 PRJNA340009_P_NODE_68279_length_164_cov_1.773913_g67972_i0 PRJNA340009 68279 164 1.773913 2.90921732 Methanofastidiosum sp. 2666341 Archaea Archaea 78.2 4.07e-15   NR HNU62017.1 2666341 g67972 i0 67.3 0.896341463414634 49 16 89.6 0 13 159 554 602 HNU62017.1 hypothetical protein [Methanofastidiosum sp.] diamond 147 78.2 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Candidatus Methanofastidiosia Candidatus Methanofastidiosales Candidatus Methanofastidiosaceae Candidatus Methanofastidiosum Methanofastidiosum sp.

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;