RNAquarium Metadata Server
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contig_metadata

13 rows where bioproject = "PRJNA340009", tax_clade = "Sar" and tax_phylum = "Apicomplexa"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Apicomplexa · 13 ✖

tax_clade 1

  • Sar · 13 ✖

bioproject 1

  • PRJNA340009 · 13 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
1069964 1069964 PRJNA340009_P_NODE_24281_length_248_cov_6.703518_g23974_i0 PRJNA340009 24281 248 6.703518 16.62472464 Eukaryota 2759 SAR_Eukaryotes SAR_Eukaryotes 60.2 1.34e-4   NTclustered gi|1280184590|gb|MG584560.1| 27996 g23974 i0 94.737 1.99193548387097 38 2 15 0 143 180 994 1031 Cytauxzoon felis isolate 10b internal transcribed spacer 1, partial sequence; 5.8S ribosomal RNA gene and internal transcribed spacer 2, complete sequence; and large subunit ribosomal RNA gene, partial sequence blastn 494 60.2 1 Eukaryota Sar   Apicomplexa Aconoidasida Piroplasmida Theileriidae Cytauxzoon Cytauxzoon felis
11871001 11871001 PRJNA340009_P_NODE_55750_length_175_cov_1.539683_g55443_i0 PRJNA340009 55750 175 1.539683 2.69444525 Plasmodium reichenowi 5854 SAR_Eukaryotes SAR_Eukaryotes 58.4 3.17e-4   NTclustered gi|1145258426|ref|XM_020114704.1| 5854 g55443 i0 94.595 0.211428571428571 37 2 21 0 17 53 1165 1201 Plasmodium reichenowi putative membrane protein partial mRNA blastn 37 58.4 1 Eukaryota Sar   Apicomplexa Aconoidasida Haemosporida Plasmodiidae Plasmodium Plasmodium reichenowi
14421326 14421326 PRJNA340009_P_NODE_75292_length_161_cov_2.732143_g74985_i0 PRJNA340009 75292 161 2.732143 4.39875023 Cryptosporidium ryanae 515981 SAR_Eukaryotes SAR_Eukaryotes 62.1 2.22e-5   NTclustered gi|2787713731|ref|XM_067342684.1| 515981 g74985 i0 94.872 0.242236024844721 39 2 24 0 13 51 558 596 Cryptosporidium ryanae 40S ribosomal protein S8 (FG386_003370), partial mRNA blastn 39 62.1 1 Eukaryota Sar   Apicomplexa Conoidasida Eucoccidiorida Cryptosporidiidae Cryptosporidium Cryptosporidium ryanae
21471821 21471821 PRJNA340009_P_NODE_54517_length_176_cov_14.275591_g54210_i0 PRJNA340009 54517 176 14.275591 25.12504016 Toxoplasma 5810 SAR_Eukaryotes SAR_Eukaryotes 87.9 4.07e-13   NTclustered gi|820701449|tpe|LN714501.1| 432359 g54210 i0 81.308 1.21590909090909 107 20 61 0 62 168 2409441 2409547 TPA_asm: Toxoplasma gondii VEG, chromosome chrXI, complete genome blastn 214 87.9 1 Eukaryota Sar   Apicomplexa Conoidasida Eucoccidiorida Sarcocystidae Toxoplasma Toxoplasma gondii
23344230 23344230 PRJNA340009_P_NODE_50579_length_182_cov_5.120301_g50272_i0 PRJNA340009 50579 182 5.120301 9.31894782 Plasmodium chabaudi 5825 SAR_Eukaryotes SAR_Eukaryotes 117 5.41e-22   NTclustered gi|1027950138|ref|XM_016797486.1| 31271 g50272 i0 85.088 8.14835164835165 114 17 100 0 69 182 751 864 Plasmodium chabaudi chabaudi polyubiquitin (PCHAS_0612000), partial mRNA blastn 1483 117 1 Eukaryota Sar   Apicomplexa Aconoidasida Haemosporida Plasmodiidae Plasmodium Plasmodium chabaudi
24618056 24618056 PRJNA340009_P_NODE_18900_length_277_cov_0.864035_g18593_i0 PRJNA340009 18900 277 0.864035 2.39337695 Neospora caninum 29176 SAR_Eukaryotes SAR_Eukaryotes 411 3.649999999999999e-110   NTclustered gi|820695469|tpe|LN714488.1| 572307 g18593 i0 94.096 28.3682310469314 271 15 100 1 1 271 301604 301873 TPA_asm: Neospora caninum Liverpool, unplaced_1, complete genome blastn 7858 411 1 Eukaryota Sar   Apicomplexa Conoidasida Eucoccidiorida Sarcocystidae Neospora Neospora caninum
26662923 26662923 PRJNA340009_P_NODE_9821_length_365_cov_2.044304_g9514_i0 PRJNA340009 9821 365 2.044304 7.4617096 Porospora cf. gigantea B 2853592 SAR_Eukaryotes SAR_Eukaryotes 56.6 2.06e-6   NR XP_068376260.1 2853592 g9514 i0 38.4 1.2 73 44 59.2 1 148 363 717 789 XP_068376260.1 MAG: uncharacterized protein KVP17_002002 [Porospora cf. gigantea B] diamond 438 56.6 1 Eukaryota Sar   Apicomplexa Conoidasida Eugregarinorida Porosporidae Porospora Porospora cf. gigantea B
26807152 26807152 PRJNA340009_P_NODE_20661_length_266_cov_3.129032_g20354_i0 PRJNA340009 20661 266 3.129032 8.32322512 root 1 Root_unresolved Root_unresolved 46.2 0.00285   NR GFE55414.1 5869 g20354 i0 65.6 4.38721804511278 32 11 36.1 0 265 170 276 307 GFE55414.1 ethanolamine-phosphate cytidylyltransferase [Babesia ovis] diamond 1167 46.2 1 Eukaryota Sar   Apicomplexa Aconoidasida Piroplasmida Babesiidae Babesia Babesia ovis
26996869 26996869 PRJNA340009_P_NODE_44842_length_191_cov_7.126761_g44535_i0 PRJNA340009 44842 191 7.126761 13.61211351 Plasmodium 5820 SAR_Eukaryotes SAR_Eukaryotes 47.8 3.08e-4   NR XP_028860367.1 5858 g44535 i0 45.8 2.26178010471204 48 26 75.4 0 145 2 199 246 XP_028860367.1 dicarboxylate/tricarboxylate carrier, putative [Plasmodium malariae] diamond 432 47.8 1 Eukaryota Sar   Apicomplexa Aconoidasida Haemosporida Plasmodiidae Plasmodium Plasmodium malariae
27376710 27376710 PRJNA340009_P_NODE_50143_length_183_cov_2.097015_g49836_i0 PRJNA340009 50143 183 2.097015 3.83753745 Piroplasmida 5863 SAR_Eukaryotes SAR_Eukaryotes 84.3 1.51e-18   NR XP_067803689.1 323732 g49836 i0 64.4 3.83606557377049 59 21 96.7 0 182 6 15 73 XP_067803689.1 bifunctional RNA recognition motif domain/RNA-binding domain superfamily/Nucleotide-binding alpha-beta plait domain superfamily [Babesia duncani] diamond 702 85.1 0.990599294947121 Eukaryota Sar   Apicomplexa Aconoidasida Piroplasmida Babesiidae Babesia Babesia duncani
29600644 29600644 PRJNA340009_P_NODE_20590_length_266_cov_9.285714_g20283_i0 PRJNA340009 20590 266 9.285714 24.69999924 Theileria equi strain WA 1537102 SAR_Eukaryotes SAR_Eukaryotes 43.9 0.00756   NR XP_004832617.1 1537102 g20283 i0 95 0.225563909774436 20 1 22.6 0 205 264 106 125 XP_004832617.1 hypothetical protein BEWA_052190 [Theileria equi strain WA] diamond 60 43.9 1 Eukaryota Sar   Apicomplexa Aconoidasida Piroplasmida Theileriidae Theileria Theileria equi
31813134 31813134 PRJNA340009_P_NODE_67357_length_165_cov_0.879310_g67050_i0 PRJNA340009 67357 165 0.87931 1.4508615 Eimeria tenella 5802 SAR_Eukaryotes SAR_Eukaryotes 43.9 0.00164   NR XP_013234134.1 5802 g67050 i0 68 0.963636363636364 25 8 45.5 0 49 123 6 30 XP_013234134.1 cytochrome c, putative [Eimeria tenella] diamond 159 43.9 1 Eukaryota Sar   Apicomplexa Conoidasida Eucoccidiorida Eimeriidae Eimeria Eimeria tenella
32572677 32572677 PRJNA340009_P_NODE_32519_length_219_cov_25.876471_g32212_i0 PRJNA340009 32519 219 25.876471 56.66947149 Cyclospora cayetanensis 88456 SAR_Eukaryotes SAR_Eukaryotes 42.7 0.028   NR OEH79025.1 88456 g32212 i0 44.7 0.643835616438356 47 26 64.4 0 43 183 491 537 OEH79025.1 endomembrane protein 70 subfamily protein [Cyclospora cayetanensis] diamond 141 42.7 1 Eukaryota Sar   Apicomplexa Conoidasida Eucoccidiorida Eimeriidae Cyclospora Cyclospora cayetanensis

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;