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contig_metadata

14 rows where bioproject = "PRJNA340009", tax_clade = "Opisthokonta" and tax_phylum = "Platyhelminthes"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Platyhelminthes · 14 ✖

tax_kingdom 1

tax_clade 1

  • Opisthokonta · 14 ✖

bioproject 1

  • PRJNA340009 · 14 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
2942922 2942922 PRJNA340009_P_NODE_47883_length_187_cov_1.239130_g47576_i0 PRJNA340009 47883 187 1.23913 2.3171731 Bresslauilla relicta 1311963 Platyhelminthes Platyhelminthes 86.1 1.58e-12   NTclustered gi|588313927|gb|KC869885.1| 1311963 g47576 i0 81.081 0.898395721925134 111 17 59 2 27 137 1606 1712 Bresslauilla relicta 28S ribosomal RNA genes, partial sequence blastn 168 86.1 1 Eukaryota Opisthokonta Metazoa Platyhelminthes Rhabditophora Rhabdocoela Graffillidae Bresslauilla Bresslauilla relicta
4219409 4219409 PRJNA340009_P_NODE_37764_length_206_cov_2.146497_g37457_i0 PRJNA340009 37764 206 2.146497 4.42178382 Opisthorchis viverrini 6198 Platyhelminthes Platyhelminthes 58.4 3.87e-4   NTclustered gi|684399524|ref|XM_009174269.1| 6198 g37457 i0 97.059 0.305825242718447 34 1 17 0 160 193 1127 1160 Opisthorchis viverrini hypothetical protein partial mRNA blastn 63 58.4 1 Eukaryota Opisthokonta Metazoa Platyhelminthes Trematoda Opisthorchiida Opisthorchiidae Opisthorchis Opisthorchis viverrini
8722584 8722584 PRJNA340009_P_NODE_38447_length_205_cov_0.923077_g38140_i0 PRJNA340009 38447 205 0.923077 1.89230785 Eukaryota 2759 unresolved_Eukaryota other_Eukaryota 147 7.98e-31   NTclustered gi|728882839|gb|KJ682398.1| 1417331 g38140 i0 81.026 97.5609756097561 195 27 94 8 12 203 1297 1110 Parotoplana primitiva isolate PVRO1 28S large subunit ribosomal RNA gene, partial sequence blastn 20000 148 0.993243243243243 Eukaryota Opisthokonta Metazoa Platyhelminthes Rhabditophora Proseriata Otoplanidae Parotoplana Parotoplana primitiva
11870641 11870641 PRJNA340009_P_NODE_25890_length_242_cov_1.849741_g25583_i0 PRJNA340009 25890 242 1.849741 4.47637322 Spirometra erinaceieuropaei 99802 Platyhelminthes Platyhelminthes 52.8 0.022   NTclustered gi|687206786|emb|LN316305.1| 99802 g25583 i0 100 0.115702479338843 28 0 12 0 72 99 651 678 Spirometra erinaceieuropaei genome assembly S_erinaceieuropaei ,scaffold SPER_contig0095815 blastn 28 52.8 1 Eukaryota Opisthokonta Metazoa Platyhelminthes Cestoda Diphyllobothriidea Diphyllobothriidae Spirometra Spirometra erinaceieuropaei
12548716 12548716 PRJNA340009_P_NODE_8010_length_396_cov_1.714697_g7703_i0 PRJNA340009 8010 396 1.714697 6.79020012 Metazoa 33208 Platyhelminthes Platyhelminthes 726 0   NTclustered gi|60687563|gb|AY914894.1| 6182 g7703 i0 99.747 100 396 1 100 0 1 396 429 34 Schistosoma japonicum unknown mRNA blastn 39600 732 0.991803278688525 Eukaryota Opisthokonta Metazoa Platyhelminthes Trematoda Strigeidida Schistosomatidae Schistosoma Schistosoma japonicum
13145909 13145909 PRJNA340009_P_NODE_5031_length_477_cov_3.091121_g4724_i0 PRJNA340009 5031 477 3.091121 14.74464717 Spirometra erinaceieuropaei 99802 Platyhelminthes Platyhelminthes 52.8 0.046   NTclustered gi|690479289|emb|LN020854.1| 99802 g4724 i0 100 0.0587002096436059 28 0 6 0 368 395 7105 7132 Spirometra erinaceieuropaei genome assembly S_erinaceieuropaei ,scaffold SPER_scaffold0020513 blastn 28 52.8 1 Eukaryota Opisthokonta Metazoa Platyhelminthes Cestoda Diphyllobothriidea Diphyllobothriidae Spirometra Spirometra erinaceieuropaei
15695231 15695231 PRJNA340009_P_NODE_79833_length_154_cov_4.628571_g79526_i0 PRJNA340009 79833 154 4.628571 7.12799934 Spirometra erinaceieuropaei 99802 Platyhelminthes Platyhelminthes 54.7 0.004   NTclustered gi|690651576|emb|LN199501.1| 99802 g79526 i0 100 0.188311688311688 29 0 19 0 24 52 878 850 Spirometra erinaceieuropaei genome assembly S_erinaceieuropaei ,scaffold SPER_scaffold0170122 blastn 29 54.7 1 Eukaryota Opisthokonta Metazoa Platyhelminthes Cestoda Diphyllobothriidea Diphyllobothriidae Spirometra Spirometra erinaceieuropaei
20196041 20196041 PRJNA340009_P_NODE_30436_length_225_cov_110.437500_g30129_i0 PRJNA340009 30436 225 110.4375 248.484375 Eukaryota 2759 unresolved_Eukaryota other_Eukaryota 73.1 1.54e-8   NTclustered gi|161651|gb|M28997.1|TAEACTB 6204 g30129 i0 100 16.96 39 0 17 0 1 39 1681 1643 Taenia solium (clone pAT6) actin gene, complete cds blastn 3816 73.1 1 Eukaryota Opisthokonta Metazoa Platyhelminthes Cestoda Cyclophyllidea Taeniidae Taenia Taenia solium
20196101 20196101 PRJNA340009_P_NODE_41736_length_197_cov_87.628378_g41429_i0 PRJNA340009 41736 197 87.628378 172.62790466 Metazoa 33208 Platyhelminthes Platyhelminthes 65.8 2.19e-6   NTclustered gi|56753358|gb|AY813151.1| 6182 g41429 i0 95.122 1.0253807106599 41 2 21 0 38 78 1722 1762 Schistosoma japonicum SJCHGC09129 protein mRNA, complete cds blastn 202 65.8 1 Eukaryota Opisthokonta Metazoa Platyhelminthes Trematoda Strigeidida Schistosomatidae Schistosoma Schistosoma japonicum
24617981 24617981 PRJNA340009_P_NODE_13180_length_323_cov_1.489051_g12873_i0 PRJNA340009 13180 323 1.489051 4.80963473 Dicrocoelium dendriticum 57078 Platyhelminthes Platyhelminthes 52.8 0.03   NTclustered gi|687397050|emb|LK727472.1| 57078 g12873 i0 100 0.086687306501548 28 0 9 0 59 86 68 41 Dicrocoelium dendriticum genome assembly D_dendriticum_Leon_v1_0_4, scaffold DDEL_scaffold0300827 blastn 28 52.8 1 Eukaryota Opisthokonta Metazoa Platyhelminthes Trematoda Plagiorchiida Dicrocoeliidae Dicrocoelium Dicrocoelium dendriticum
26916519 26916519 PRJNA340009_P_NODE_55382_length_175_cov_2.888889_g55075_i0 PRJNA340009 55382 175 2.888889 5.05555575 Schistosoma japonicum 6182 Platyhelminthes Platyhelminthes 61.2 4.67e-10   NR AAW27122.1 6182 g55075 i0 90 0.514285714285714 30 3 51.4 0 1 90 19 48 AAW27122.1 SJCHGC01951 protein [Schistosoma japonicum] diamond 90 61.2 1 Eukaryota Opisthokonta Metazoa Platyhelminthes Trematoda Strigeidida Schistosomatidae Schistosoma Schistosoma japonicum
29663734 29663734 PRJNA340009_P_NODE_35250_length_212_cov_2.153374_g34943_i0 PRJNA340009 35250 212 2.153374 4.56515288 Calicophoron daubneyi 300641 Platyhelminthes Platyhelminthes 42 0.0476   NR CAL5135732.1 300641 g34943 i0 46.2 0.367924528301887 26 14 36.8 0 155 78 903 928 CAL5135732.1 unnamed protein product [Calicophoron daubneyi] diamond 78 42 1 Eukaryota Opisthokonta Metazoa Platyhelminthes Trematoda Plagiorchiida Paramphistomidae Calicophoron Calicophoron daubneyi
30927918 30927918 PRJNA340009_P_NODE_19134_length_275_cov_2.884956_g18827_i0 PRJNA340009 19134 275 2.884956 7.933629 Schistosoma turkestanicum 1163369 Platyhelminthes Platyhelminthes 60.8 2.22e-8   NR CAH8593878.1 1163369 g18827 i0 33.7 3.66545454545455 86 52 88.4 1 27 269 10 95 CAH8593878.1 unnamed protein product [Schistosoma turkestanicum] diamond 1008 60.8 1 Eukaryota Opisthokonta Metazoa Platyhelminthes Trematoda Strigeidida Schistosomatidae Schistosoma Schistosoma turkestanicum
32431626 32431626 PRJNA340009_P_NODE_80379_length_153_cov_2.826923_g80072_i0 PRJNA340009 80379 153 2.826923 4.32519219 Metazoa 33208 Platyhelminthes Platyhelminthes 47.4 1.84e-5   NR XP_024356037.1 6210 g80072 i0 77.8 9.17647058823529 27 6 52.9 0 148 68 29 55 XP_024356037.1 60S ribosomal protein L29 [Echinococcus granulosus] diamond 1404 47.4 1 Eukaryota Opisthokonta Metazoa Platyhelminthes Cestoda Cyclophyllidea Taeniidae Echinococcus Echinococcus granulosus

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;