RNAquarium Metadata Server
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contig_metadata

3 rows where bioproject = "PRJNA340009", tax_clade = "Opisthokonta" and tax_phylum = "Bryozoa"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Bryozoa · 3 ✖

tax_kingdom 1

tax_clade 1

  • Opisthokonta · 3 ✖

bioproject 1

  • PRJNA340009 · 3 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
5495825 5495825 PRJNA340009_P_NODE_40645_length_200_cov_1.298013_g40338_i0 PRJNA340009 40645 200 1.298013 2.596026 Stylopoma viride 2865421 Bryozoa other_Eukaryota 82.4 2.22e-11   NTclustered gi|2075442493|gb|MZ677775.1| 2865421 g40338 i0 96 14.36 50 2 25 0 56 105 3609 3658 Stylopoma viride voucher BLEED1541 large subunit ribosomal RNA gene, partial sequence blastn 2872 82.4 1 Eukaryota Opisthokonta Metazoa Bryozoa Gymnolaemata Cheilostomatida Schizoporellidae Stylopoma Stylopoma viride
8045656 8045656 PRJNA340009_P_NODE_59667_length_169_cov_9.116667_g59360_i0 PRJNA340009 59667 169 9.116667 15.40716723 Plumatella sp. ZHY-2005 365321 Bryozoa other_Eukaryota 91.6 2.99e-14   NTclustered gi|90992874|gb|DQ333339.1| 365321 g59360 i0 91.176 3.36686390532544 68 4 40 2 1 67 355 289 Plumatella sp. ZHY-2005 28S ribosomal RNA gene, partial sequence blastn 569 91.6 1 Eukaryota Opisthokonta Metazoa Bryozoa Phylactolaemata   Plumatellidae Plumatella Plumatella sp. ZHY-2005
9998076 9998076 PRJNA340009_P_NODE_16208_length_295_cov_14.658537_g15901_i0 PRJNA340009 16208 295 14.658537 43.24268415 Eukaryota 2759 unresolved_Eukaryota other_Eukaryota 88.6 2.29e-18   NR KAF6024418.1 10212 g15901 i0 75.9 15.9254237288136 58 14 59 0 188 15 296 353 KAF6024418.1 PSMC1 [Bugula neritina] diamond 4698 89.4 0.991051454138702 Eukaryota Opisthokonta Metazoa Bryozoa Gymnolaemata Cheilostomatida Bugulidae Bugula Bugula neritina

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;