RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA340009", tax_clade = "Metamonada" and tax_phylum = "Preaxostyla"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Preaxostyla · 2 ✖

tax_clade 1

  • Metamonada · 2 ✖

bioproject 1

  • PRJNA340009 · 2 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
1666710 1666710 PRJNA340009_P_NODE_32542_length_219_cov_7.623529_g32235_i0 PRJNA340009 32542 219 7.6235290000000004 16.69552851 Monocercomonoides exilis 2049356 Preaxostyla other_Eukaryota 54.7 0.005   NTclustered gi|2794954566|ref|XM_067868229.1| 2049356 g32235 i0 100 0.388127853881279 29 0 13 0 75 103 3882 3854 Monocercomonoides exilis uncharacterized protein (MONOS_15362), partial mRNA blastn 85 54.7 1 Eukaryota Metamonada   Preaxostyla   Oxymonadida Polymastigidae Monocercomonoides Monocercomonoides exilis
31528577 31528577 PRJNA340009_P_NODE_64436_length_166_cov_0.871795_g64129_i0 PRJNA340009 64436 166 0.871795 1.4471797 Paratrimastix pyriformis 342808 Preaxostyla other_Eukaryota 55.5 3.4e-7   NR KAJ4460042.1 342808 g64129 i0 54 1.80722891566265 50 22 88.6 1 12 158 121 170 KAJ4460042.1 putative Lactonase drp35 [Paratrimastix pyriformis] diamond 300 55.5 1 Eukaryota Metamonada   Preaxostyla     Paratrimastigidae Paratrimastix Paratrimastix pyriformis

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;