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contig_metadata

9 rows where bioproject = "PRJNA340009", tax_clade = "FCB group" and tax_phylum = "Candidatus Latescibacterota"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Candidatus Latescibacterota · 9 ✖

tax_kingdom 1

tax_clade 1

  • FCB group · 9 ✖

bioproject 1

  • PRJNA340009 · 9 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
13145734 13145734 PRJNA340009_P_NODE_35071_length_212_cov_29.754601_g34764_i0 PRJNA340009 35071 212 29.754601 63.07975412 Candidatus Latescibacterota bacterium 2053570 Bacteria Bacteria 52.8 0.019   NTclustered gi|2108425585|gb|CP070631.1| 2053570 g34764 i0 100 0.132075471698113 28 0 13 0 164 191 3278671 3278644 MAG: Candidatus Latescibacterota bacterium isolate bin977 chromosome blastn 28 52.8 1 Bacteria FCB group Pseudomonadati Candidatus Latescibacterota         Candidatus Latescibacterota bacterium
20196213 20196213 PRJNA340009_P_NODE_63836_length_166_cov_1.717949_g63529_i0 PRJNA340009 63836 166 1.717949 2.85179534 Bacteria 2 Bacteria Bacteria 174 2.84e-39   NTclustered gi|2518550840|emb|OX638317.1| 199737 g63529 i0 85.629 264.698795180723 167 22 100 2 1 166 3960900 3961065 MAG: uncultured Latescibacteria bacterium isolate cbbe8a84-e08a-4d06-a76e-2eb930d8ff24 genome assembly, chromosome: 1 blastn 43940 174 1 Bacteria FCB group Pseudomonadati Candidatus Latescibacterota         uncultured Latescibacterota bacterium
28211488 28211488 PRJNA340009_P_NODE_26226_length_240_cov_273.172775_g25919_i0 PRJNA340009 26226 240 273.172775 655.61466 Candidatus Latescibacterota bacterium 2053570 Bacteria Bacteria 112 2.75e-28   NR MBT5829377.1 2053570 g25919 i0 69.3 0.9375 75 23 93.8 0 240 16 209 283 MBT5829377.1 NAD-dependent epimerase/dehydratase family protein [Candidatus Latescibacterota bacterium] diamond 225 112 1 Bacteria FCB group Pseudomonadati Candidatus Latescibacterota         Candidatus Latescibacterota bacterium
29506179 29506179 PRJNA340009_P_NODE_74570_length_162_cov_0.902655_g74263_i0 PRJNA340009 74570 162 0.902655 1.4623011 Candidatus Latescibacterota bacterium 2053570 Bacteria Bacteria 65.1 1.5e-10   NR MCC7263500.1 2053570 g74263 i0 55.8 0.962962962962963 52 23 96.3 0 7 162 220 271 MCC7263500.1 hypothetical protein [Candidatus Latescibacterota bacterium] diamond 156 65.1 1 Bacteria FCB group Pseudomonadati Candidatus Latescibacterota         Candidatus Latescibacterota bacterium
29853664 29853664 PRJNA340009_P_NODE_59411_length_170_cov_1.685950_g59104_i0 PRJNA340009 59411 170 1.68595 2.866115 Candidatus Latescibacterota bacterium 2053570 Bacteria Bacteria 62 1.96e-9   NR MEW6753161.1 2053570 g59104 i0 55.4 5.87647058823529 56 25 98.8 0 3 170 57 112 MEW6753161.1 site-specific integrase [Candidatus Latescibacterota bacterium] diamond 999 62 1 Bacteria FCB group Pseudomonadati Candidatus Latescibacterota         Candidatus Latescibacterota bacterium
29965651 29965651 PRJNA340009_P_NODE_79151_length_156_cov_4.728972_g78844_i0 PRJNA340009 79151 156 4.728972 7.37719632 Bacteria 2 Bacteria Bacteria 62.4 2.64e-10   NR RKY69496.1 2053570 g78844 i0 78.9 8.75 38 8 73.1 0 155 42 34 71 RKY69496.1 MAG: translation initiation factor IF-3 [Candidatus Latescibacterota bacterium] diamond 1365 62.4 1 Bacteria FCB group Pseudomonadati Candidatus Latescibacterota         Candidatus Latescibacterota bacterium
31781353 31781353 PRJNA340009_P_NODE_73117_length_162_cov_1.805310_g72810_i0 PRJNA340009 73117 162 1.80531 2.9246022 Candidatus Latescibacterota bacterium 2053570 Bacteria Bacteria 99 4.709999999999999e-23   NR MBI4551439.1 2053570 g72810 i0 94.3 0.981481481481482 53 3 98.1 0 161 3 258 310 MBI4551439.1 hypothetical protein [Candidatus Latescibacterota bacterium] diamond 159 99 1 Bacteria FCB group Pseudomonadati Candidatus Latescibacterota         Candidatus Latescibacterota bacterium
32273517 32273517 PRJNA340009_P_NODE_71538_length_163_cov_0.894737_g71231_i0 PRJNA340009 71538 163 0.894737 1.45842131 Bacteria 2 Bacteria Bacteria 49.3 3.84e-6   NR MBI4552011.1 2053570 g71231 i0 100 0.809815950920245 22 0 40.5 0 163 98 39 60 MBI4552011.1 type II toxin-antitoxin system HicA family toxin [Candidatus Latescibacterota bacterium] diamond 132 49.3 1 Bacteria FCB group Pseudomonadati Candidatus Latescibacterota         Candidatus Latescibacterota bacterium
32319721 32319721 PRJNA340009_P_NODE_64879_length_166_cov_0.871795_g64572_i0 PRJNA340009 64879 166 0.871795 1.4471797 Candidatus Latescibacterota bacterium 2053570 Bacteria Bacteria 41.2 0.0442   NR HIE04775.1 2053570 g64572 i0 55.6 0.650602409638554 36 14 61.4 1 104 3 169 204 HIE04775.1 hypothetical protein [Candidatus Latescibacterota bacterium] diamond 108 41.2 1 Bacteria FCB group Pseudomonadati Candidatus Latescibacterota         Candidatus Latescibacterota bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;