RNAquarium Metadata Server
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contig_metadata

1 row where bioproject = "PRJNA340009" and tax_clade = "Cruciviruses"

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tax_superkingdom 1

tax_clade 1

  • Cruciviruses · 1 ✖

bioproject 1

  • PRJNA340009 · 1 ✖

analysis 1

tax_phylum 0

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
30169364 30169364 PRJNA340009_P_NODE_66952_length_165_cov_0.879310_g66645_i0 PRJNA340009 66952 165 0.87931 1.4508615 Crucivirus-119 2761219 Viruses Viruses 63.2 5.96e-10   NR QMW68665.1 2761219 g66645 i0 56.3 0.872727272727273 48 21 87.3 0 155 12 157 204 QMW68665.1 replication-associated protein [Crucivirus-119] diamond 144 63.2 1 Viruses Cruciviruses             Crucivirus-119

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;