RNAquarium Metadata Server
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contig_metadata

3 rows where bioproject = "PRJNA339266", tax_phylum = "Peploviricota" and tax_superkingdom = "Viruses"

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tax_superkingdom 1

  • Viruses · 3 ✖

tax_phylum 1

  • Peploviricota · 3 ✖

tax_kingdom 1

bioproject 1

  • PRJNA339266 · 3 ✖

analysis 1

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
1069863 1069863 PRJNA339266_S_NODE_6221_length_202_cov_867.387879_g6210_i0 PRJNA339266 6221 202 867.387879 1752.12351558 root 1 Root_unresolved Root_unresolved 178 2.7799999999999993e-40   NTclustered gi|671698184|gb|KM192300.1| 10359 g6210 i0 96.296 73.9405940594059 108 4 70 0 1 108 39177 39070 Human herpesvirus 5 strain Merlin isolate RCMV1528, complete genome blastn 14936 178 1 Viruses   Heunggongvirae Peploviricota Herviviricetes Herpesvirales Orthoherpesviridae Cytomegalovirus Cytomegalovirus humanbeta5
11273070 11273070 PRJNA339266_S_NODE_6749_length_198_cov_102.366460_g6738_i0 PRJNA339266 6749 198 102.36646 202.6855908 root 1 Root_unresolved Root_unresolved 287 4.32e-73   NTclustered gi|671698184|gb|KM192300.1| 10359 g6738 i0 93.75 112.767676767677 192 11 97 1 1 191 39267 39076 Human herpesvirus 5 strain Merlin isolate RCMV1528, complete genome blastn 22328 287 1 Viruses   Heunggongvirae Peploviricota Herviviricetes Herpesvirales Orthoherpesviridae Cytomegalovirus Cytomegalovirus humanbeta5
17647455 17647455 PRJNA339266_P_NODE_2554_length_214_cov_83.954802_g2524_i0 PRJNA339266 2554 214 83.954802 179.66327628 root 1 Root_unresolved Root_unresolved 99 2.39e-16   NTclustered gi|671698184|gb|KM192300.1| 10359 g2524 i0 95.161 87.0373831775701 62 3 87 0 143 204 39250 39311 Human herpesvirus 5 strain Merlin isolate RCMV1528, complete genome blastn 18626 99 1 Viruses   Heunggongvirae Peploviricota Herviviricetes Herpesvirales Orthoherpesviridae Cytomegalovirus Cytomegalovirus humanbeta5

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;