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contig_metadata

6 rows where bioproject = "PRJNA339266", tax_clade = "Opisthokonta" and tax_phylum = "Mollusca"

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tax_superkingdom 1

tax_phylum 1

  • Mollusca · 6 ✖

tax_kingdom 1

tax_clade 1

  • Opisthokonta · 6 ✖

bioproject 1

  • PRJNA339266 · 6 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
1665953 1665953 PRJNA339266_P_NODE_4042_length_193_cov_2.115385_g4012_i0 PRJNA339266 4042 193 2.115385 4.08269305 Bradybaena similaris 145626 Mollusca Mollusca 60.2 9.94e-5   NTclustered gi|2912983111|dbj|AP039588.1| 145626 g4012 i0 100 9.41450777202073 32 0 17 0 129 160 36272037 36272006 Bradybaena similaris mixture of YIPCMo001421 and YIPCMo001540 DNA, chromosome 7, sequence blastn 1817 60.2 1 Eukaryota Opisthokonta Metazoa Mollusca Gastropoda Stylommatophora Camaenidae Bradybaena Bradybaena similaris
11870087 11870087 PRJNA339266_S_NODE_1590_length_284_cov_8.469636_g1579_i0 PRJNA339266 1590 284 8.469636 24.05376624 Bradybaena similaris 145626 Mollusca Mollusca 52.8 0.026   NTclustered gi|2913000417|dbj|AP039607.1| 145626 g1579 i0 100 0.0985915492957746 28 0 10 0 38 65 8953122 8953149 Bradybaena similaris mixture of YIPCMo001421 and YIPCMo001540 DNA, chromosome 26, sequence blastn 28 52.8 1 Eukaryota Opisthokonta Metazoa Mollusca Gastropoda Stylommatophora Camaenidae Bradybaena Bradybaena similaris
11870146 11870146 PRJNA339266_S_NODE_18850_length_152_cov_2.513043_g18839_i0 PRJNA339266 18850 152 2.513043 3.81982536 Bradybaena similaris 145626 Mollusca Mollusca 52.8 0.012   NTclustered gi|2912994531|dbj|AP039599.1| 145626 g18839 i0 100 0.184210526315789 28 0 18 0 85 112 67127969 67127942 Bradybaena similaris mixture of YIPCMo001421 and YIPCMo001540 DNA, chromosome 18, sequence blastn 28 52.8 1 Eukaryota Opisthokonta Metazoa Mollusca Gastropoda Stylommatophora Camaenidae Bradybaena Bradybaena similaris
23343611 23343611 PRJNA339266_S_NODE_7859_length_190_cov_25.379085_g7848_i0 PRJNA339266 7859 190 25.379085 48.2202615 Bradybaena similaris 145626 Mollusca Mollusca 75 3.48e-9   NTclustered gi|2912981848|dbj|AP039587.1| 145626 g7848 i0 92.308 4.41578947368421 52 4 27 0 137 188 26693064 26693115 Bradybaena similaris mixture of YIPCMo001421 and YIPCMo001540 DNA, chromosome 6, sequence blastn 839 75 1 Eukaryota Opisthokonta Metazoa Mollusca Gastropoda Stylommatophora Camaenidae Bradybaena Bradybaena similaris
24021632 24021632 PRJNA339266_S_NODE_4639_length_218_cov_4.215470_g4628_i0 PRJNA339266 4639 218 4.21547 9.1897246 Metazoa 33208 Mollusca Mollusca 54.7 0.005   NTclustered gi|1897916392|ref|XM_013079538.2| 6500 g4628 i0 100 0.669724770642202 29 0 13 0 72 100 1480 1452 PREDICTED: Aplysia californica rhomboid-related protein 2 (LOC101845073), mRNA blastn 146 54.7 1 Eukaryota Opisthokonta Metazoa Mollusca Gastropoda Aplysiida Aplysiidae Aplysia Aplysia californica
24617646 24617646 PRJNA339266_S_NODE_19680_length_150_cov_6.221239_g19669_i0 PRJNA339266 19680 150 6.221239 9.3318585 Octopus sinensis 2607531 Mollusca Mollusca 58.4 2.63e-4   NTclustered gi|1914637952|ref|XM_029791933.2| 2607531 g19669 i0 94.595 5.63333333333333 37 2 25 0 24 60 925 889 PREDICTED: Octopus sinensis zinc finger protein 345-like (LOC115221721), transcript variant X1, mRNA blastn 845 58.4 1 Eukaryota Opisthokonta Metazoa Mollusca Cephalopoda Octopoda Octopodidae Octopus Octopus sinensis

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;