RNAquarium Metadata Server
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contig_metadata

3 rows where bioproject = "PRJNA339266" and tax_clade = "Bacteria candidate phyla"

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tax_superkingdom 1

tax_clade 1

  • Bacteria candidate phyla · 3 ✖

bioproject 1

  • PRJNA339266 · 3 ✖

analysis 1

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
26885010 26885010 PRJNA339266_P_NODE_6621_length_170_cov_6.563910_g6591_i0 PRJNA339266 6621 170 6.56391 11.158647 Candidatus Rokuibacteriota bacterium 2053607 Bacteria Bacteria 70.1 3.11e-12   NR MBM4442690.1 2053607 g6591 i0 55 4.28823529411765 60 23 98.8 1 170 3 225 284 MBM4442690.1 alpha/beta fold hydrolase [Candidatus Rokuibacteriota bacterium] diamond 729 70.1 1 Bacteria Bacteria candidate phyla   Candidatus Rokuibacteriota         Candidatus Rokuibacteriota bacterium
27043068 27043068 PRJNA339266_S_NODE_4882_length_216_cov_1.541899_g4871_i0 PRJNA339266 4882 216 1.541899 3.33050184 Candidatus Saccharimonadota bacterium 2026720 Bacteria Bacteria 63.2 6.1e-10   NR MCA9332930.1 2026720 g4871 i0 38 1.94444444444444 71 43 97.2 1 210 1 4 74 MCA9332930.1 hypothetical protein [Candidatus Saccharibacteria bacterium] diamond 420 63.2 1 Bacteria Bacteria candidate phyla   Candidatus Saccharimonadota         Candidatus Saccharimonadota bacterium
27611895 27611895 PRJNA339266_S_NODE_4484_length_220_cov_2.486339_g4473_i0 PRJNA339266 4484 220 2.486339 5.4699458 Candidatus Levyibacteriota bacterium 2052151 Bacteria Bacteria 87.4 2.43e-18   NR MBP6913188.1 2052151 g4473 i0 55.7 0.954545454545455 70 31 95.5 0 211 2 92 161 MBP6913188.1 hypothetical protein [Candidatus Levyibacteriota bacterium] diamond 210 87.4 1 Bacteria Bacteria candidate phyla   Candidatus Levyibacteriota         Candidatus Levyibacteriota bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;