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contig_metadata

15 rows where bioproject = "PRJNA335774" and tax_superkingdom = "Archaea"

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tax_superkingdom 1

  • Archaea · 15 ✖

tax_clade 1

bioproject 1

  • PRJNA335774 · 15 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
6768591 6768591 PRJNA335774_P_NODE_9606_length_467_cov_1.172589_g9454_i0 PRJNA335774 9606 467 1.172589 5.47599063 Thermoplasmatota archaeon 2806419 Archaea Archaea 132 8.48e-35   NR MEF8873749.1 2806419 g9454 i0 48 6.56531049250535 127 61 81.6 1 381 1 60 181 MEF8873749.1 peptide-methionine (S)-S-oxide reductase MsrA [Thermoplasmatota archaeon] diamond 3066 132 1 Archaea   Methanobacteriati Thermoplasmatota         Thermoplasmatota archaeon
27043021 27043021 PRJNA335774_P_NODE_2162_length_860_cov_1.860229_g2045_i0 PRJNA335774 2162 860 1.860229 15.9979694 archaeon 1906665 Archaea Archaea 164 6.849999999999999e-46   NR RYH18247.1 1906665 g2045 i0 41.5 0.781395348837209 224 115 73.3 5 89 718 15 236 RYH18247.1 MAG: glutathione S-transferase family protein [archaeon] diamond 672 164 1 Archaea               archaeon
27264378 27264378 PRJNA335774_P_NODE_24883_length_313_cov_0.958333_g24731_i0 PRJNA335774 24883 313 0.958333 2.99958229 archaeon 1906665 Archaea Archaea 85.1 1.17e-16   NR MFH1849615.1 1906665 g24731 i0 42 0.958466453674121 100 55 93 1 3 293 3884 3983 MFH1849615.1 LamG domain-containing protein [archaeon] diamond 300 85.1 1 Archaea               archaeon
28179811 28179811 PRJNA335774_P_NODE_23886_length_318_cov_1.175510_g23734_i0 PRJNA335774 23886 318 1.17551 3.7381218 Candidatus Nanoarchaeia archaeon 2910166 Archaea Archaea 51.6 5.25e-5   NR HLC90789.1 2910166 g23734 i0 42.3 0.735849056603774 78 45 73.6 0 236 3 153 230 HLC90789.1 hypothetical protein [Candidatus Nanoarchaeia archaeon] diamond 234 51.6 1 Archaea   Nanobdellati Nanobdellota Candidatus Nanoarchaeia       Candidatus Nanoarchaeia archaeon
28274687 28274687 PRJNA335774_P_NODE_4806_length_626_cov_2.164557_g4661_i0 PRJNA335774 4806 626 2.164557 13.55012682 Nanobdellota archaeon 2026764 Archaea Archaea 109 1.5500000000000002e-26   NR MBU1976054.1 2026764 g4661 i0 61.3 1.15974440894569 80 31 38.3 0 12 251 61 140 MBU1976054.1 nucleoside 2-deoxyribosyltransferase [Nanoarchaeota archaeon] diamond 726 109 1 Archaea   Nanobdellati Nanobdellota         Nanobdellota archaeon
28527580 28527580 PRJNA335774_P_NODE_15227_length_383_cov_1.335484_g15075_i0 PRJNA335774 15227 383 1.335484 5.11490372 archaeon 1906665 Archaea Archaea 108 1.79e-26   NR RYH18247.1 1906665 g15075 i0 47.6 3.52480417754569 103 54 80.7 0 383 75 24 126 RYH18247.1 MAG: glutathione S-transferase family protein [archaeon] diamond 1350 108 1 Archaea               archaeon
29064274 29064274 PRJNA335774_P_NODE_31128_length_282_cov_2.196172_g30976_i0 PRJNA335774 31128 282 2.196172 6.19320504 Candidatus Tiamatella sp. 3150758 Archaea Archaea 58.2 3.13e-8   NR MEB3825148.1 3150758 g30976 i0 44.4 0.765957446808511 72 40 76.6 0 233 18 65 136 MEB3825148.1 DMT family transporter [Candidatus Tiamatella sp.] diamond 216 58.2 1 Archaea   Thermoproteati Thermoproteota Thermoprotei Acidilobales Acidilobaceae Candidatus Tiamatella Candidatus Tiamatella sp.
29600585 29600585 PRJNA335774_P_NODE_10970_length_441_cov_1.046196_g10818_i0 PRJNA335774 10970 441 1.046196 4.61372436 archaeon 1906665 Archaea Archaea 123 1.19e-31   NR RYG60812.1 1906665 g10818 i0 48.7 0.782312925170068 115 59 78.2 0 438 94 137 251 RYG60812.1 MAG: hypothetical protein EON64_19060, partial [archaeon] diamond 345 123 1 Archaea               archaeon
29744202 29744202 PRJNA335774_P_NODE_15450_length_381_cov_1.058442_g15298_i0 PRJNA335774 15450 381 1.058442 4.03266402 root 1 Root_unresolved Root_unresolved 150 2.3e-40   NR MAO99966.1 2026739 g15298 i0 58.8 10.3622047244094 119 49 93.7 0 3 359 76 194 MAO99966.1 cytosol nonspecific dipeptidase [Methanobacteriota archaeon] diamond 3948 151 0.993377483443709 Archaea   Methanobacteriati Methanobacteriota         Methanobacteriota archaeon
30169262 30169262 PRJNA335774_P_NODE_2992_length_760_cov_2.448326_g2861_i0 PRJNA335774 2992 760 2.448326 18.6072776 archaeon 1906665 Archaea Archaea 159 2.18e-44   NR RYH18247.1 1906665 g2861 i0 41.4 0.828947368421053 210 111 78.6 3 714 118 15 223 RYH18247.1 MAG: glutathione S-transferase family protein [archaeon] diamond 630 159 1 Archaea               archaeon
31496895 31496895 PRJNA335774_P_NODE_13716_length_401_cov_0.875000_g13564_i0 PRJNA335774 13716 401 0.875 3.50875 archaeon 1906665 Archaea Archaea 73.6 1.17e-12   NR RYH20030.1 1906665 g13564 i0 41.8 0.591022443890274 79 44 59.1 1 401 165 61 137 RYH20030.1 MAG: hypothetical protein EON65_24855 [archaeon] diamond 237 73.6 1 Archaea               archaeon
32002914 32002914 PRJNA335774_P_NODE_33558_length_272_cov_1.547739_g33406_i0 PRJNA335774 33558 272 1.547739 4.20985008 Candidatus Thalassarchaeaceae archaeon 2670411 Archaea Archaea 64.3 1.28e-9   NR MCP2503036.1 2670411 g33406 i0 68.3 4.34558823529412 41 13 45.2 0 2 124 372 412 MCP2503036.1 pyridoxal phosphate-dependent aminotransferase [Candidatus Thalassarchaeaceae archaeon] diamond 1182 64.3 1 Archaea   Methanobacteriati Thermoplasmatota Candidatus Poseidoniia Candidatus Poseidoniales Candidatus Thalassarchaeaceae   Candidatus Thalassarchaeaceae archaeon
32097736 32097736 PRJNA335774_P_NODE_40058_length_250_cov_0.870056_g39906_i0 PRJNA335774 40058 250 0.870056 2.17514 Nanobdellota archaeon 2026764 Archaea Archaea 55.8 8.58e-7   NR MEK6829599.1 2026764 g39906 i0 39 0.984 82 49 97.2 1 6 248 147 228 MEK6829599.1 hypothetical protein [Nanoarchaeota archaeon] diamond 246 55.8 1 Archaea   Nanobdellati Nanobdellota         Nanobdellota archaeon
32129609 32129609 PRJNA335774_P_NODE_14298_length_393_cov_1.575000_g14146_i0 PRJNA335774 14298 393 1.575 6.18975 Methanothrix sp. 90426 Archaea Archaea 48.1 0.00237   NR MDD4162744.1 90426 g14146 i0 46.8 0.358778625954198 47 24 35.1 1 186 49 354 400 MDD4162744.1 PAN domain-containing protein [Methanothrix sp.] diamond 141 48.1 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Methanomicrobia Methanotrichales Methanotrichaceae Methanothrix Methanothrix sp.
32414339 32414339 PRJNA335774_P_NODE_4939_length_619_cov_3.846154_g4794_i0 PRJNA335774 4939 619 3.846154 23.80769326 archaeon 1906665 Archaea Archaea 147 2.1e-40   NR RYH18247.1 1906665 g4794 i0 44.4 0.906300484652666 187 93 85.8 4 619 89 49 234 RYH18247.1 MAG: glutathione S-transferase family protein [archaeon] diamond 561 147 1 Archaea               archaeon

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;