RNAquarium Metadata Server
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contig_metadata

3 rows where bioproject = "PRJNA335774" and tax_phylum = "Candidatus Saccharimonadota"

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tax_superkingdom 1

tax_phylum 1

  • Candidatus Saccharimonadota · 3 ✖

tax_clade 1

bioproject 1

  • PRJNA335774 · 3 ✖

analysis 1

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
27043046 27043046 PRJNA335774_P_NODE_40882_length_249_cov_0.875000_g40730_i0 PRJNA335774 40882 249 0.875 2.17875 Candidatus Saccharimonadota bacterium 2026720 Bacteria Bacteria 99.4 5.1e-22   NR MDB5166996.1 2026720 g40730 i0 60.2 1.18072289156627 98 23 100 2 249 1 799 895 MDB5166996.1 hypothetical protein [Candidatus Saccharibacteria bacterium] diamond 294 99.4 1 Bacteria Bacteria candidate phyla   Candidatus Saccharimonadota         Candidatus Saccharimonadota bacterium
27485465 27485465 PRJNA335774_P_NODE_33963_length_271_cov_0.934343_g33811_i0 PRJNA335774 33963 271 0.934343 2.53206953 Candidatus Saccharibacteria bacterium 2026720 Bacteria Bacteria 58.2 1.41e-7   NR TAH32226.1 2026720 g33811 i0 48.3 1.51660516605166 58 30 64.2 0 92 265 39 96 TAH32226.1 MAG: hypothetical protein EYC58_03400 [Candidatus Saccharibacteria bacterium] diamond 411 58.2 1 Bacteria Bacteria candidate phyla   Candidatus Saccharimonadota         Candidatus Saccharimonadota bacterium
28622264 28622264 PRJNA335774_P_NODE_48407_length_241_cov_0.916667_g48255_i0 PRJNA335774 48407 241 0.916667 2.20916747 Candidatus Saccharimonadales bacterium 2973664 Bacteria Bacteria 155 8.479999999999997e-42   NR HSX49303.1 2973664 g48255 i0 93.8 0.995850622406639 80 5 99.6 0 241 2 824 903 HSX49303.1 ATP-dependent DNA helicase [Candidatus Saccharimonadales bacterium] diamond 240 155 1 Bacteria Bacteria candidate phyla   Candidatus Saccharimonadota Candidatus Saccharimonadia Candidatus Saccharimonadales     Candidatus Saccharimonadales bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;