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contig_metadata

29 rows where bioproject = "PRJNA335774", tax_kingdom = "Pseudomonadati" and tax_phylum = "Myxococcota"

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tax_superkingdom 1

tax_phylum 1

  • Myxococcota · 29 ✖

tax_kingdom 1

  • Pseudomonadati · 29 ✖

bioproject 1

  • PRJNA335774 · 29 ✖

analysis 1

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
26662790 26662790 PRJNA335774_P_NODE_16961_length_367_cov_1.170068_g16809_i0 PRJNA335774 16961 367 1.170068 4.29414956 Myxococcales bacterium 2026763 Bacteria Bacteria 60.5 2.2e-8   NR MCA9671053.1 2026763 g16809 i0 35.9 0.841961852861035 103 55 76 2 28 306 55 156 MCA9671053.1 hypothetical protein [Myxococcales bacterium] diamond 309 60.5 1 Bacteria   Pseudomonadati Myxococcota Myxococcia Myxococcales     Myxococcales bacterium
27043054 27043054 PRJNA335774_P_NODE_4682_length_633_cov_1.289286_g4537_i0 PRJNA335774 4682 633 1.289286 8.16118038 Myxococcales bacterium 2026763 Bacteria Bacteria 46.2 0.0492   NR MCA9647516.1 2026763 g4537 i0 33 0.4739336492891 100 61 46.4 4 226 519 246 341 MCA9647516.1 hypothetical protein [Myxococcales bacterium] diamond 300 46.2 1 Bacteria   Pseudomonadati Myxococcota Myxococcia Myxococcales     Myxococcales bacterium
27232642 27232642 PRJNA335774_P_NODE_30023_length_287_cov_1.313084_g29871_i0 PRJNA335774 30023 287 1.313084 3.76855108 Corallococcus carmarthensis 2316728 Bacteria Bacteria 46.2 0.00383   NR WP_158625800.1 2316728 g29871 i0 37.2 2.61324041811847 86 51 89.9 3 258 1 235 317 WP_158625800.1 TIR domain-containing protein [Corallococcus carmarthensis] diamond 750 46.2 1 Bacteria   Pseudomonadati Myxococcota Myxococcia Myxococcales Myxococcaceae Corallococcus Corallococcus carmarthensis
27295883 27295883 PRJNA335774_P_NODE_12283_length_420_cov_1.893372_g12131_i0 PRJNA335774 12283 420 1.893372 7.9521624 Anaeromyxobacteraceae bacterium 2510643 Bacteria Bacteria 47.8 0.00396   NR MFL5274676.1 2510643 g12131 i0 39.4 0.707142857142857 99 52 70 4 417 124 79 170 MFL5274676.1 hypothetical protein [Anaeromyxobacteraceae bacterium] diamond 297 47.8 1 Bacteria   Pseudomonadati Myxococcota Myxococcia Myxococcales Anaeromyxobacteraceae   Anaeromyxobacteraceae bacterium
27359297 27359297 PRJNA335774_P_NODE_45123_length_244_cov_1.350877_g44971_i0 PRJNA335774 45123 244 1.350877 3.29613988 Myxococcales bacterium 2026763 Bacteria Bacteria 51.6 2.72e-5   NR MBV72346.1 2026763 g44971 i0 57.1 0.516393442622951 42 11 51.6 1 96 221 245 279 MBV72346.1 hypothetical protein [Myxococcales bacterium] diamond 126 51.6 1 Bacteria   Pseudomonadati Myxococcota Myxococcia Myxococcales     Myxococcales bacterium
27580082 27580082 PRJNA335774_P_NODE_12644_length_415_cov_1.368421_g12492_i0 PRJNA335774 12644 415 1.368421 5.67894715 Deltaproteobacteria bacterium 2026735 Bacteria Bacteria 42 0.048   NR MBM4321556.1 2026735 g12492 i0 42.3 0.375903614457831 52 29 37.6 1 198 43 22 72 MBM4321556.1 hypothetical protein [Deltaproteobacteria bacterium] diamond 156 42 1 Bacteria   Pseudomonadati Myxococcota Myxococcia       Deltaproteobacteria bacterium
27580100 27580100 PRJNA335774_P_NODE_29064_length_291_cov_1.743119_g28912_i0 PRJNA335774 29064 291 1.743119 5.07247629 Myxococcales bacterium 2026763 Bacteria Bacteria 71.6 4.72e-12   NR MCA9676067.1 2026763 g28912 i0 46.8 1.68041237113402 79 37 81.4 1 267 31 160 233 MCA9676067.1 histidinol-phosphate aminotransferase family protein [Myxococcales bacterium] diamond 489 71.6 1 Bacteria   Pseudomonadati Myxococcota Myxococcia Myxococcales     Myxococcales bacterium
27706867 27706867 PRJNA335774_P_NODE_31444_length_281_cov_1.413462_g31292_i0 PRJNA335774 31444 281 1.413462 3.97182822 Deltaproteobacteria bacterium 2026735 Bacteria Bacteria 154 7.719999999999998e-42   NR MBI2389879.1 2026735 g31292 i0 74.7 1.9644128113879 91 23 97.2 0 6 278 408 498 MBI2389879.1 RICIN domain-containing protein [Deltaproteobacteria bacterium] diamond 552 154 1 Bacteria   Pseudomonadati Myxococcota Myxococcia       Deltaproteobacteria bacterium
28022335 28022335 PRJNA335774_P_NODE_13005_length_410_cov_1.448071_g12853_i0 PRJNA335774 13005 410 1.448071 5.9370911 Myxococcales bacterium 2026763 Bacteria Bacteria 47 0.00742   NR MCO4760791.1 2026763 g12853 i0 51.2 0.724390243902439 43 21 31.5 0 165 37 302 344 MCO4760791.1 lamin tail domain-containing protein [Myxococcales bacterium] diamond 297 47 1 Bacteria   Pseudomonadati Myxococcota Myxococcia Myxococcales     Myxococcales bacterium
28053659 28053659 PRJNA335774_P_NODE_3545_length_710_cov_1.682889_g3406_i0 PRJNA335774 3545 710 1.682889 11.9485119 Myxococcota bacterium 2818507 Bacteria Bacteria 295 2.9999999999999993e-96   NR MCS6914888.1 2818507 g3406 i0 59.8 1.96901408450704 234 94 98.9 0 2 703 24 257 MCS6914888.1 methyltransferase domain-containing protein [Myxococcota bacterium] diamond 1398 295 1 Bacteria   Pseudomonadati Myxococcota         Myxococcota bacterium
28179830 28179830 PRJNA335774_P_NODE_45046_length_244_cov_1.801170_g44894_i0 PRJNA335774 45046 244 1.80117 4.3948548 Minicystis rosea 888845 Bacteria Bacteria 45.8 0.00318   NR APR85582.1 888845 g44894 i0 43.7 0.872950819672131 71 35 86.1 2 22 231 8 74 APR85582.1 kinesin light chain-like protein [Minicystis rosea] diamond 213 45.8 1 Bacteria   Pseudomonadati Myxococcota   Polyangiales Polyangiaceae Minicystis Minicystis rosea
29001400 29001400 PRJNA335774_P_NODE_48588_length_241_cov_0.863095_g48436_i0 PRJNA335774 48588 241 0.863095 2.08005895 Polyangiaceae bacterium 2268199 Bacteria Bacteria 56.2 6.15e-7   NR HLK41500.1 2268199 g48436 i0 43.8 0.995850622406639 80 37 95.9 3 233 3 67 141 HLK41500.1 carboxylesterase/lipase family protein [Polyangiaceae bacterium] diamond 240 56.2 1 Bacteria   Pseudomonadati Myxococcota   Polyangiales Polyangiaceae   Polyangiaceae bacterium
29127535 29127535 PRJNA335774_P_NODE_47909_length_241_cov_1.267857_g47757_i0 PRJNA335774 47909 241 1.267857 3.05553537 Deltaproteobacteria bacterium 2026735 Bacteria Bacteria 44.3 0.00926   NR RLB48292.1 2026735 g47757 i0 51.5 0.410788381742739 33 14 41.1 1 90 188 226 256 RLB48292.1 MAG: hypothetical protein DRJ42_23560 [Deltaproteobacteria bacterium] diamond 99 44.3 1 Bacteria   Pseudomonadati Myxococcota Myxococcia       Deltaproteobacteria bacterium
29632088 29632088 PRJNA335774_P_NODE_20410_length_339_cov_4.372180_g20258_i0 PRJNA335774 20410 339 4.37218 14.8216902 Myxococcales bacterium 2026763 Bacteria Bacteria 47.8 0.00203   NR MCO4760791.1 2026763 g20258 i0 60 0.309734513274336 35 14 31 0 103 207 302 336 MCO4760791.1 lamin tail domain-containing protein [Myxococcales bacterium] diamond 105 47.8 1 Bacteria   Pseudomonadati Myxococcota Myxococcia Myxococcales     Myxococcales bacterium
29695262 29695262 PRJNA335774_P_NODE_4610_length_636_cov_1.230906_g4467_i0 PRJNA335774 4610 636 1.230906 7.82856216 Polyangiaceae bacterium 2268199 Bacteria Bacteria 60.5 2.08e-7   NR HMJ57057.1 2268199 g4467 i0 36.2 0.325471698113208 69 43 32.1 1 515 312 108 176 HMJ57057.1 hypothetical protein [Polyangiaceae bacterium] diamond 207 60.5 1 Bacteria   Pseudomonadati Myxococcota   Polyangiales Polyangiaceae   Polyangiaceae bacterium
29885246 29885246 PRJNA335774_P_NODE_19031_length_349_cov_2.010870_g18879_i0 PRJNA335774 19031 349 2.01087 7.0179363 Myxococcota bacterium 2818507 Bacteria Bacteria 43.1 0.0496   NR MEE2959811.1 2818507 g18879 i0 29.4 0.584527220630373 68 48 58.5 0 4 207 45 112 MEE2959811.1 hypothetical protein [Myxococcota bacterium] diamond 204 43.1 1 Bacteria   Pseudomonadati Myxococcota         Myxococcota bacterium
29979865 29979865 PRJNA335774_P_NODE_37511_length_256_cov_1.262295_g37359_i0 PRJNA335774 37511 256 1.262295 3.2314752 Sandaracinus sp. 2024858 Bacteria Bacteria 42.7 0.0429   NR MFO0684939.1 2024858 g37359 i0 33.9 0.7265625 62 33 72.7 2 244 59 219 272 MFO0684939.1 matrixin family metalloprotease [Sandaracinus sp.] diamond 186 42.7 1 Bacteria   Pseudomonadati Myxococcota   Polyangiales Sandaracinaceae Sandaracinus Sandaracinus sp.
30264538 30264538 PRJNA335774_P_NODE_43192_length_246_cov_2.791908_g43040_i0 PRJNA335774 43192 246 2.791908 6.86809368 Myxococcales bacterium 2026763 Bacteria Bacteria 51.2 1.84e-5   NR MCA9671053.1 2026763 g43040 i0 36.6 0.865853658536585 71 39 79.3 1 49 243 70 140 MCA9671053.1 hypothetical protein [Myxococcales bacterium] diamond 213 51.2 1 Bacteria   Pseudomonadati Myxococcota Myxococcia Myxococcales     Myxococcales bacterium
30281907 30281907 PRJNA335774_P_NODE_20212_length_341_cov_1.097015_g20060_i0 PRJNA335774 20212 341 1.097015 3.74082115 Nannocystaceae 224463 Bacteria Bacteria 130 4.4199999999999985e-34   NR WP_224192401.1 889268 g20060 i0 53 4.80351906158358 100 47 88 0 339 40 254 353 WP_224192401.1 Rieske 2Fe-2S domain-containing protein [Nannocystis pusilla] diamond 1638 130 1 Bacteria   Pseudomonadati Myxococcota   Nannocystales Nannocystaceae Nannocystis Nannocystis pusilla
30345234 30345234 PRJNA335774_P_NODE_4412_length_647_cov_1.508711_g4269_i0 PRJNA335774 4412 647 1.508711 9.76136017 Bacteria 2 Bacteria Bacteria 115 6.330000000000001e-27   NR HEX3758815.1 2212474 g4269 i0 35 5.29984544049459 217 119 96.4 7 5 628 58 261 HEX3758815.1 hypothetical protein [Kofleriaceae bacterium] diamond 3429 115 1 Bacteria   Pseudomonadati Myxococcota   Haliangiales Kofleriaceae   Kofleriaceae bacterium
30832930 30832930 PRJNA335774_P_NODE_34954_length_266_cov_1.958549_g34802_i0 PRJNA335774 34954 266 1.958549 5.20974034 Myxococcota bacterium 2818507 Bacteria Bacteria 43.9 0.0158   NR MEE2835165.1 2818507 g34802 i0 35.3 0.766917293233083 68 41 73.3 1 47 241 18 85 MEE2835165.1 hypothetical protein [Myxococcota bacterium] diamond 204 43.9 1 Bacteria   Pseudomonadati Myxococcota         Myxococcota bacterium
31180174 31180174 PRJNA335774_P_NODE_6915_length_538_cov_1.292473_g6764_i0 PRJNA335774 6915 538 1.292473 6.95350474 Kofleriaceae bacterium 2212474 Bacteria Bacteria 70.5 1.95e-10   NR MBP6837768.1 2212474 g6764 i0 45.9 1.23791821561338 74 35 41.3 1 280 59 2534 2602 MBP6837768.1 hypothetical protein [Kofleriaceae bacterium] diamond 666 70.5 1 Bacteria   Pseudomonadati Myxococcota   Haliangiales Kofleriaceae   Kofleriaceae bacterium
31545830 31545830 PRJNA335774_P_NODE_27856_length_297_cov_1.263393_g27704_i0 PRJNA335774 27856 297 1.263393 3.75227721 Pseudomonadati 3379134 Bacteria Bacteria 119 3.73e-29   NR MCA9626175.1 2026763 g27704 i0 64.6 5.66666666666667 96 32 97 1 5 292 236 329 MCA9626175.1 tryptophanase [Myxococcales bacterium] diamond 1683 119 1 Bacteria   Pseudomonadati Myxococcota Myxococcia Myxococcales     Myxococcales bacterium
32034540 32034540 PRJNA335774_P_NODE_36098_length_262_cov_1.148148_g35946_i0 PRJNA335774 36098 262 1.148148 3.00814776 Deltaproteobacteria bacterium 2026735 Bacteria Bacteria 65.1 5.16e-10   NR RLB46302.1 2026735 g35946 i0 53 4.05343511450382 66 31 75.6 0 3 200 271 336 RLB46302.1 MAG: hypothetical protein DRJ42_27970 [Deltaproteobacteria bacterium] diamond 1062 65.1 1 Bacteria   Pseudomonadati Myxococcota Myxococcia       Deltaproteobacteria bacterium
32319621 32319621 PRJNA335774_P_NODE_40539_length_249_cov_1.448864_g40387_i0 PRJNA335774 40539 249 1.448864 3.60767136 Deltaproteobacteria bacterium 2026735 Bacteria Bacteria 45.1 0.00596   NR MBS2024131.1 2026735 g40387 i0 50 2.91566265060241 38 19 45.8 0 130 17 320 357 MBS2024131.1 hypothetical protein [Deltaproteobacteria bacterium] diamond 726 45.1 1 Bacteria   Pseudomonadati Myxococcota Myxococcia       Deltaproteobacteria bacterium
32382597 32382597 PRJNA335774_P_NODE_9259_length_474_cov_1.511222_g9107_i0 PRJNA335774 9259 474 1.511222 7.16319228 Cystobacter sp. 1965334 Bacteria Bacteria 76.3 8.09e-13   NR MET0402051.1 1965334 g9107 i0 34.4 1.03164556962025 163 88 94.9 8 18 467 136 292 MET0402051.1 phosphatidylinositol-specific phospholipase C [Cystobacter sp.] diamond 489 76.3 1 Bacteria   Pseudomonadati Myxococcota Myxococcia Myxococcales Archangiaceae Cystobacter Cystobacter sp.
32400006 32400006 PRJNA335774_P_NODE_15679_length_379_cov_0.993464_g15527_i0 PRJNA335774 15679 379 0.993464 3.76522856 Pseudomonadati 3379134 Bacteria Bacteria 59.7 1.94e-7   NR MES1174858.1 2026763 g15527 i0 55.6 5.69129287598945 54 24 42.7 0 3 164 360 413 MES1174858.1 cation:proton antiporter [Myxococcales bacterium] diamond 2157 60.1 0.993344425956739 Bacteria   Pseudomonadati Myxococcota Myxococcia Myxococcales     Myxococcales bacterium
32414295 32414295 PRJNA335774_P_NODE_15499_length_380_cov_1.850163_g15347_i0 PRJNA335774 15499 380 1.850163 7.0306194 Myxococcales bacterium 2026763 Bacteria Bacteria 50.4 1.4e-4   NR MCA9671053.1 2026763 g15347 i0 34.9 0.678947368421053 86 46 60 2 229 2 65 150 MCA9671053.1 hypothetical protein [Myxococcales bacterium] diamond 258 50.4 1 Bacteria   Pseudomonadati Myxococcota Myxococcia Myxococcales     Myxococcales bacterium
32792544 32792544 PRJNA335774_P_NODE_35720_length_263_cov_1.605263_g35568_i0 PRJNA335774 35720 263 1.605263 4.22184169 Deltaproteobacteria bacterium 2026735 Bacteria Bacteria 50.4 2.56e-5   NR MFP6608719.1 2026735 g35568 i0 39.6 1.36882129277567 53 32 60.5 0 225 67 81 133 MFP6608719.1 DUF1330 domain-containing protein [Deltaproteobacteria bacterium] diamond 360 50.4 1 Bacteria   Pseudomonadati Myxococcota Myxococcia       Deltaproteobacteria bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;