RNAquarium Metadata Server
Institute Website Terms of Use Privacy Policy

contig_metadata

19 rows where bioproject = "PRJNA335774", tax_clade = "Sar" and tax_phylum = "Apicomplexa"

✎ View and edit SQL

This data as json, CSV (advanced)

analysis 2

tax_superkingdom 1

tax_phylum 1

  • Apicomplexa · 19 ✖

tax_clade 1

  • Sar · 19 ✖

bioproject 1

  • PRJNA335774 · 19 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
1069768 1069768 PRJNA335774_P_NODE_8641_length_489_cov_1.233173_g8489_i0 PRJNA335774 8641 489 1.233173 6.03021597 Babesia 5864 SAR_Eukaryotes SAR_Eukaryotes 58.4 0.001   NTclustered gi|1126394179|gb|M99575.2|BBOMER77K 5865 g8489 i0 89.13 4 46 5 9 0 163 208 1298 1343 Babesia bovis 85 kDa merozoite protein gene, complete cds blastn 1956 58.4 1 Eukaryota Sar   Apicomplexa Aconoidasida Piroplasmida Babesiidae Babesia Babesia bovis
6768050 6768050 PRJNA335774_P_NODE_30466_length_285_cov_1.448113_g30314_i0 PRJNA335774 30466 285 1.448113 4.12712205 Eimeria acervulina 5801 SAR_Eukaryotes SAR_Eukaryotes 224 5.269999999999999e-54   NTclustered gi|42525238|gb|AY459430.1| 5801 g30314 i0 80.919 19.4561403508772 283 54 99 0 3 285 1396 1114 Eimeria acervulina isolate 12 heat shock protein 90 (Hsp90) gene, complete cds blastn 5545 224 1 Eukaryota Sar   Apicomplexa Conoidasida Eucoccidiorida Eimeriidae Eimeria Eimeria acervulina
15693197 15693197 PRJNA335774_P_NODE_3453_length_716_cov_2.071540_g3314_i0 PRJNA335774 3453 716 2.07154 14.8322264 Plasmodium coatneyi 208452 SAR_Eukaryotes SAR_Eukaryotes 250 2.37e-61   NTclustered gi|1139862844|ref|XM_020059300.1| 208452 g3314 i0 75.775 61.7625698324022 516 114 71 10 138 647 586 76 Plasmodium coatneyi GTP-binding nuclear protein partial mRNA blastn 44222 250 1 Eukaryota Sar   Apicomplexa Aconoidasida Haemosporida Plasmodiidae Plasmodium Plasmodium coatneyi
15693471 15693471 PRJNA335774_P_NODE_48053_length_241_cov_0.916667_g47901_i0 PRJNA335774 48053 241 0.916667 2.20916747 Neospora caninum 29176 SAR_Eukaryotes SAR_Eukaryotes 60.2 1.3e-4   NTclustered gi|820693004|tpe|LN714485.1| 572307 g47901 i0 100 0.265560165975104 32 0 13 0 188 219 2580288 2580319 TPA_asm: Neospora caninum Liverpool, chromosome chrX, complete genome blastn 64 60.2 1 Eukaryota Sar   Apicomplexa Conoidasida Eucoccidiorida Sarcocystidae Neospora Neospora caninum
18921049 18921049 PRJNA335774_P_NODE_22035_length_328_cov_2.760784_g21883_i0 PRJNA335774 22035 328 2.760784 9.05537152 Eukaryota 2759 SAR_Eukaryotes SAR_Eukaryotes 87.9 8.46e-13   NTclustered gi|2794948076|ref|XR_010957801.1| 5871 g21883 i0 98 31.6859756097561 50 1 15 0 42 91 3406 3455 Babesia caballi 28S ribosomal RNA (BcabD6B2_91120), rRNA blastn 10393 87.9 1 Eukaryota Sar   Apicomplexa Aconoidasida Piroplasmida Babesiidae Babesia Babesia caballi
22067301 22067301 PRJNA335774_P_NODE_5618_length_587_cov_1.844358_g5469_i0 PRJNA335774 5618 587 1.844358 10.82638146 Eukaryota 2759 SAR_Eukaryotes SAR_Eukaryotes 187 3.87e-57   NR UKK01874.1 68886 g5469 i0 68.5 8.42248722316865 149 44 74.6 2 42 479 1 149 UKK01874.1 calmodulin [Theileria orientalis] diamond 4944 188 0.99468085106383 Eukaryota Sar   Apicomplexa Aconoidasida Piroplasmida Theileriidae Theileria Theileria orientalis
23342874 23342874 PRJNA335774_P_NODE_9959_length_460_cov_1.149871_g9807_i0 PRJNA335774 9959 460 1.149871 5.2894066 Eimeria necatrix 51315 SAR_Eukaryotes SAR_Eukaryotes 52.8 0.045   NTclustered gi|921126845|ref|XM_013582578.1| 51315 g9807 i0 100 0.0608695652173913 28 0 6 0 332 359 524 497 Eimeria necatrix hypothetical protein partial mRNA blastn 28 52.8 1 Eukaryota Sar   Apicomplexa Conoidasida Eucoccidiorida Eimeriidae Eimeria Eimeria necatrix
27011269 27011269 PRJNA335774_P_NODE_24682_length_314_cov_0.958506_g24530_i0 PRJNA335774 24682 314 0.958506 3.00970884 Cryptosporidium muris RN66 441375 SAR_Eukaryotes SAR_Eukaryotes 49.7 3.25e-4   NR XP_002140872.1 441375 g24530 i0 35.6 2.42675159235669 87 47 81.2 3 59 313 1302 1381 XP_002140872.1 endonuclease/exonuclease/phosphatase family protein [Cryptosporidium muris RN66] diamond 762 49.7 1 Eukaryota Sar   Apicomplexa Conoidasida Eucoccidiorida Cryptosporidiidae Cryptosporidium Cryptosporidium muris
27123229 27123229 PRJNA335774_P_NODE_32942_length_275_cov_1.143564_g32790_i0 PRJNA335774 32942 275 1.143564 3.144801 Apicomplexa 5794 SAR_Eukaryotes SAR_Eukaryotes 84 1.71e-16   NR KAF7457131.1 83540 g32790 i0 52.1 2.61818181818182 73 35 79.6 0 38 256 134 206 KAF7457131.1 putative cell-cycle-associated protein kinase MAPK [Cryptosporidium felis] diamond 720 84 1 Eukaryota Sar   Apicomplexa Conoidasida Eucoccidiorida Cryptosporidiidae Cryptosporidium Cryptosporidium felis
27787044 27787044 PRJNA335774_P_NODE_12564_length_416_cov_1.513120_g12412_i0 PRJNA335774 12564 416 1.51312 6.2945792 Cryptosporidium 5806 SAR_Eukaryotes SAR_Eukaryotes 78.6 4.03e-14   NR KAF7455983.1 83540 g12412 i0 37.3 6.38942307692308 110 69 79.3 0 411 82 196 305 KAF7455983.1 TBC domain-containing protein [Cryptosporidium felis] diamond 2658 78.6 1 Eukaryota Sar   Apicomplexa Conoidasida Eucoccidiorida Cryptosporidiidae Cryptosporidium Cryptosporidium felis
28481524 28481524 PRJNA335774_P_NODE_39526_length_251_cov_0.865169_g39374_i0 PRJNA335774 39526 251 0.865169 2.17157419 Eukaryota 2759 SAR_Eukaryotes SAR_Eukaryotes 102 3.569999999999999e-23   NR XP_026192387.1 88456 g39374 i0 55.1 16.1593625498008 78 34 93.2 1 17 250 234 310 XP_026192387.1 importin subunit alpha-1a [Cyclospora cayetanensis] diamond 4056 103 0.990291262135922 Eukaryota Sar   Apicomplexa Conoidasida Eucoccidiorida Eimeriidae Cyclospora Cyclospora cayetanensis
29127510 29127510 PRJNA335774_P_NODE_24869_length_313_cov_0.962500_g24717_i0 PRJNA335774 24869 313 0.9625 3.012625 Theileria equi strain WA 1537102 SAR_Eukaryotes SAR_Eukaryotes 44.7 0.0183   NR XP_004831371.1 1537102 g24717 i0 29.8 0.805111821086262 84 58 79.6 1 255 7 216 299 XP_004831371.1 hypothetical protein BEWA_011230 [Theileria equi strain WA] diamond 252 44.7 1 Eukaryota Sar   Apicomplexa Aconoidasida Piroplasmida Theileriidae Theileria Theileria equi
29870779 29870779 PRJNA335774_P_NODE_1531_length_978_cov_1.667403_g1438_i0 PRJNA335774 1531 978 1.667403 16.30720134 Eimeriidae 5799 SAR_Eukaryotes SAR_Eukaryotes 61.6 2.55e-6   NR XP_013249226.1 5801 g1438 i0 54.5 0.806748466257669 44 20 13.5 0 22 153 533 576 XP_013249226.1 hypothetical protein, conserved [Eimeria acervulina] diamond 789 61.6 1 Eukaryota Sar   Apicomplexa Conoidasida Eucoccidiorida Eimeriidae Eimeria Eimeria acervulina
30692134 30692134 PRJNA335774_P_NODE_32053_length_279_cov_0.912621_g31901_i0 PRJNA335774 32053 279 0.912621 2.54621259 Eukaryota 2759 SAR_Eukaryotes SAR_Eukaryotes 117 3.5999999999999996e-31   NR 2RHD_A 5807 g31901 i0 56.2 54.6236559139785 89 39 95.7 0 1 267 37 125 2RHD_A Chain A, Small GTP binding protein rab1a [Cryptosporidium parvum] diamond 15240 118 0.991525423728814 Eukaryota Sar   Apicomplexa Conoidasida Eucoccidiorida Cryptosporidiidae Cryptosporidium Cryptosporidium parvum
31180133 31180133 PRJNA335774_P_NODE_21095_length_335_cov_1.000000_g20943_i0 PRJNA335774 21095 335 1 3.35 Sarcocystis calchasi 1344799 SAR_Eukaryotes SAR_Eukaryotes 59.7 1.27e-7   NR CAL7858378.1 1344799 g20943 i0 52.3 0.394029850746269 44 21 39.4 0 203 334 895 938 CAL7858378.1 unnamed protein product [Sarcocystis calchasi] diamond 132 59.7 1 Eukaryota Sar   Apicomplexa Conoidasida Eucoccidiorida Sarcocystidae Sarcocystis Sarcocystis calchasi
31402059 31402059 PRJNA335774_P_NODE_45896_length_244_cov_0.859649_g45744_i0 PRJNA335774 45896 244 0.859649 2.09754356 Besnoitia besnoiti 94643 SAR_Eukaryotes SAR_Eukaryotes 56.6 4.99e-7   NR XP_029215613.1 94643 g45744 i0 43.3 0.737704918032787 60 33 73.8 1 7 186 623 681 XP_029215613.1 EGF family domain-containing protein [Besnoitia besnoiti] diamond 180 56.6 1 Eukaryota Sar   Apicomplexa Conoidasida Eucoccidiorida Sarcocystidae Besnoitia Besnoitia besnoiti
31528498 31528498 PRJNA335774_P_NODE_32596_length_276_cov_1.517241_g32444_i0 PRJNA335774 32596 276 1.517241 4.18758516 Cyclospora cayetanensis 88456 SAR_Eukaryotes SAR_Eukaryotes 43.1 0.0382   NR OEH78494.1 88456 g32444 i0 55.6 0.978260869565217 45 16 45.7 2 269 144 293 336 OEH78494.1 microneme protein [Cyclospora cayetanensis] diamond 270 43.1 1 Eukaryota Sar   Apicomplexa Conoidasida Eucoccidiorida Eimeriidae Cyclospora Cyclospora cayetanensis
31591828 31591828 PRJNA335774_P_NODE_24896_length_313_cov_0.925000_g24744_i0 PRJNA335774 24896 313 0.925 2.89525 Babesia sp. Xinjiang 462227 SAR_Eukaryotes SAR_Eukaryotes 76.6 1.05e-13   NR XP_028870119.1 462227 g24744 i0 39.6 1.72523961661342 106 54 92 2 288 1 121 226 XP_028870119.1 Mitogen-activated protein kinase 7 [Babesia sp. Xinjiang] diamond 540 76.6 1 Eukaryota Sar   Apicomplexa Aconoidasida Piroplasmida Babesiidae Babesia Babesia sp. Xinjiang
31988457 31988457 PRJNA335774_P_NODE_5298_length_603_cov_1.139623_g5152_i0 PRJNA335774 5298 603 1.139623 6.87192669 root 1 Root_unresolved Root_unresolved 114 1.97e-25   NR OEH79845.1 88456 g5152 i0 39.4 3.86567164179104 170 99 84.1 3 527 21 582 748 OEH79845.1 ser thr phosphatase family protein [Cyclospora cayetanensis] diamond 2331 114 1 Eukaryota Sar   Apicomplexa Conoidasida Eucoccidiorida Eimeriidae Cyclospora Cyclospora cayetanensis

Advanced export

JSON shape: default, array, newline-delimited

CSV options: 

CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;