RNAquarium Metadata Server
Institute Website Terms of Use Privacy Policy

contig_metadata

35 rows where bioproject = "PRJNA335774" and tax_clade = "Discoba"

✎ View and edit SQL

This data as json, CSV (advanced)

tax_phylum 2

analysis 2

tax_superkingdom 1

tax_clade 1

  • Discoba · 35 ✖

bioproject 1

  • PRJNA335774 · 35 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
2344861 2344861 PRJNA335774_P_NODE_19482_length_346_cov_1.271062_g19330_i0 PRJNA335774 19482 346 1.271062 4.39787452 root 1 Root_unresolved Root_unresolved 71.6 8.57e-12   NR CUG92370.1 75058 g19330 i0 62.5 0.858381502890173 48 18 41.6 0 3 146 153 200 CUG92370.1 homospermidine synthase, putative [Bodo saltans] diamond 297 71.6 1 Eukaryota Discoba   Euglenozoa Kinetoplastea Eubodonida Bodonidae Bodo Bodo saltans
6767970 6767970 PRJNA335774_P_NODE_27446_length_299_cov_1.353982_g27294_i0 PRJNA335774 27446 299 1.353982 4.04840618 Seculamonas ecuadoriensis 221724 Root_unresolved Root_unresolved 281 3.26e-71   NTclustered gi|2443276569|gb|OP760369.1| 221724 g27294 i0 83.838 84.1404682274247 297 46 99 2 1 296 710 1005 Seculamonas ecuadoriensis V-type proton ATPase subunit B mRNA, complete cds blastn 25158 281 1 Eukaryota Discoba       Jakobida   Seculamonas Seculamonas ecuadoriensis
18241602 18241602 PRJNA335774_P_NODE_12215_length_421_cov_2.310345_g12063_i0 PRJNA335774 12215 421 2.310345 9.72655245 Leishmania sp. Namibia 2802991 Euglenozoa other_Eukaryota 250 1.34e-61   NTclustered gi|2794984235|ref|XM_067854863.1| 2802991 g12063 i0 79.666 12.0641330166271 359 63 84 7 35 388 38 391 Leishmania sp. Namibia uncharacterized protein (JIQ42_06774), partial mRNA blastn 5079 250 1 Eukaryota Discoba   Euglenozoa Kinetoplastea Trypanosomatida Trypanosomatidae Leishmania Leishmania sp. Namibia
26694664 26694664 PRJNA335774_P_NODE_12621_length_415_cov_1.675439_g12469_i0 PRJNA335774 12621 415 1.675439 6.95307185 Bodo saltans 75058 Euglenozoa other_Eukaryota 207 2.71e-61   NR CUG92370.1 75058 g12469 i0 68.7 0.968674698795181 134 42 96.9 0 415 14 429 562 CUG92370.1 homospermidine synthase, putative [Bodo saltans] diamond 402 207 1 Eukaryota Discoba   Euglenozoa Kinetoplastea Eubodonida Bodonidae Bodo Bodo saltans
26884958 26884958 PRJNA335774_P_NODE_16281_length_373_cov_1.026667_g16129_i0 PRJNA335774 16281 373 1.026667 3.82946791 Diplonema papillatum 91374 Euglenozoa other_Eukaryota 114 9.12e-27   NR KAJ9449114.1 91374 g16129 i0 49.6 1.00536193029491 125 61 98.9 2 371 3 44 168 KAJ9449114.1 Homocysteine S-methyltransferase 1 [Diplonema papillatum] diamond 375 114 1 Eukaryota Discoba   Euglenozoa Diplonemea   Diplonemidae Diplonema Diplonema papillatum
26884971 26884971 PRJNA335774_P_NODE_24441_length_315_cov_1.206612_g24289_i0 PRJNA335774 24441 315 1.206612 3.8008278 Diplonema papillatum 91374 Euglenozoa other_Eukaryota 84.7 1.51e-16   NR KAJ9473679.1 91374 g24289 i0 39.8 0.933333333333333 98 57 91.4 1 27 314 128 225 KAJ9473679.1 hypothetical protein DIPPA_17107 [Diplonema papillatum] diamond 294 84.7 1 Eukaryota Discoba   Euglenozoa Diplonemea   Diplonemidae Diplonema Diplonema papillatum
27011293 27011293 PRJNA335774_P_NODE_43822_length_246_cov_0.890173_g43670_i0 PRJNA335774 43822 246 0.890173 2.18982558 Diplonema papillatum 91374 Euglenozoa other_Eukaryota 80.9 1.73e-16   NR KAJ9445758.1 91374 g43670 i0 46.5 2.65853658536585 71 38 86.6 0 11 223 19 89 KAJ9445758.1 1-acyl-sn-glycerol-3-phosphate acyltransferase PLS1 [Diplonema papillatum] diamond 654 80.9 1 Eukaryota Discoba   Euglenozoa Diplonemea   Diplonemidae Diplonema Diplonema papillatum
27264380 27264380 PRJNA335774_P_NODE_27143_length_300_cov_2.030837_g26991_i0 PRJNA335774 27143 300 2.030837 6.092511 Diplonema papillatum 91374 Euglenozoa other_Eukaryota 144 2.54e-41   NR KAJ9446956.1 91374 g26991 i0 65.3 2.95 98 34 98 0 5 298 1 98 KAJ9446956.1 Superoxide dismutase [Diplonema papillatum] diamond 885 144 1 Eukaryota Discoba   Euglenozoa Diplonemea   Diplonemidae Diplonema Diplonema papillatum
27327574 27327574 PRJNA335774_P_NODE_18823_length_351_cov_1.377698_g18671_i0 PRJNA335774 18823 351 1.377698 4.83571998 Bodo saltans 75058 Euglenozoa other_Eukaryota 138 3.1e-35   NR CUG86525.1 75058 g18671 i0 60 0.982905982905983 115 44 96.6 2 11 349 575 689 CUG86525.1 ferric reductase, putative [Bodo saltans] diamond 345 138 1 Eukaryota Discoba   Euglenozoa Kinetoplastea Eubodonida Bodonidae Bodo Bodo saltans
27832670 27832670 PRJNA335774_P_NODE_21644_length_331_cov_1.193798_g21492_i0 PRJNA335774 21644 331 1.193798 3.95147138 Trypanosoma rangeli 5698 Euglenozoa other_Eukaryota 60.5 6.35e-8   NR XP_029235404.1 5698 g21492 i0 40.7 0.978851963746224 108 59 97 4 324 4 154 257 XP_029235404.1 putative ferric reductase [Trypanosoma rangeli] diamond 324 60.5 1 Eukaryota Discoba   Euglenozoa Kinetoplastea Trypanosomatida Trypanosomatidae Trypanosoma Trypanosoma rangeli
27864172 27864172 PRJNA335774_P_NODE_13565_length_402_cov_3.398176_g13413_i0 PRJNA335774 13565 402 3.398176 13.66066752 Diplonema papillatum 91374 Euglenozoa other_Eukaryota 179 1.9499999999999998e-54   NR KAJ9450032.1 91374 g13413 i0 75 0.776119402985075 104 26 77.6 0 2 313 92 195 KAJ9450032.1 Superoxide dismutase [Diplonema papillatum] diamond 312 179 1 Eukaryota Discoba   Euglenozoa Diplonemea   Diplonemidae Diplonema Diplonema papillatum
28085238 28085238 PRJNA335774_P_NODE_1745_length_934_cov_2.324042_g1644_i0 PRJNA335774 1745 934 2.324042 21.70655228 Diplonema papillatum 91374 Euglenozoa other_Eukaryota 347 9.72e-114   NR KAJ9452996.1 91374 g1644 i0 53.6 3.11563169164882 338 127 99.6 4 2 931 10 345 KAJ9452996.1 Adenylate kinase 3, partial [Diplonema papillatum] diamond 2910 347 1 Eukaryota Discoba   Euglenozoa Diplonemea   Diplonemidae Diplonema Diplonema papillatum
28306364 28306364 PRJNA335774_P_NODE_28766_length_293_cov_1.050000_g28614_i0 PRJNA335774 28766 293 1.05 3.0765 Bodo saltans 75058 Euglenozoa other_Eukaryota 48.1 7.76e-4   NR CUE87126.1 75058 g28614 i0 39.1 0.706484641638225 69 33 69.6 3 246 43 125 185 CUE87126.1 Hypothetical protein, putative [Bodo saltans] diamond 207 48.1 1 Eukaryota Discoba   Euglenozoa Kinetoplastea Eubodonida Bodonidae Bodo Bodo saltans
28495943 28495943 PRJNA335774_P_NODE_24347_length_315_cov_1.842975_g24195_i0 PRJNA335774 24347 315 1.842975 5.80537125 Diplonema papillatum 91374 Euglenozoa other_Eukaryota 124 2.32e-33   NR KAJ9446956.1 91374 g24195 i0 64 2.47619047619048 86 31 81.9 0 259 2 1 86 KAJ9446956.1 Superoxide dismutase [Diplonema papillatum] diamond 780 124 1 Eukaryota Discoba   Euglenozoa Diplonemea   Diplonemidae Diplonema Diplonema papillatum
29001371 29001371 PRJNA335774_P_NODE_20788_length_337_cov_1.053030_g20636_i0 PRJNA335774 20788 337 1.05303 3.5487111 Naegleria lovaniensis 51637 Heterolobosea other_Eukaryota 47.8 0.00179   NR XP_044547435.1 51637 g20636 i0 39.4 0.587537091988131 66 37 57.9 2 5 199 330 393 XP_044547435.1 uncharacterized protein C9374_006140 [Naegleria lovaniensis] diamond 198 47.8 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria lovaniensis
29222224 29222224 PRJNA335774_P_NODE_7849_length_508_cov_1.331034_g7697_i0 PRJNA335774 7849 508 1.331034 6.76165272 Diplonema papillatum 91374 Euglenozoa other_Eukaryota 166 3.2899999999999993e-46   NR KAJ9446193.1 91374 g7697 i0 57 0.797244094488189 135 58 79.7 0 3 407 263 397 KAJ9446193.1 hypothetical protein DIPPA_23822, partial [Diplonema papillatum] diamond 405 166 1 Eukaryota Discoba   Euglenozoa Diplonemea   Diplonemidae Diplonema Diplonema papillatum
29334014 29334014 PRJNA335774_P_NODE_8129_length_501_cov_1.418224_g7977_i0 PRJNA335774 8129 501 1.418224 7.10530224 Kinetoplastea 5653 Euglenozoa other_Eukaryota 216 1.9199999999999997e-66   NR XP_029241872.1 5698 g7977 i0 67.8 10.5269461077844 149 45 87.4 3 500 63 202 350 XP_029241872.1 iron superoxide dismutase [Trypanosoma rangeli] diamond 5274 218 0.990825688073395 Eukaryota Discoba   Euglenozoa Kinetoplastea Trypanosomatida Trypanosomatidae Trypanosoma Trypanosoma rangeli
29411389 29411389 PRJNA335774_P_NODE_41309_length_249_cov_0.875000_g41157_i0 PRJNA335774 41309 249 0.875 2.17875 Naegleria gruberi 5762 Heterolobosea other_Eukaryota 48.1 4.9e-4   NR XP_002674284.1 5762 g41157 i0 40 0.72289156626506 60 34 72.3 1 38 217 123 180 XP_002674284.1 uncharacterized protein NAEGRDRAFT_70572 [Naegleria gruberi] diamond 180 48.1 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria gruberi
29649343 29649343 PRJNA335774_P_NODE_23630_length_319_cov_1.540650_g23478_i0 PRJNA335774 23630 319 1.54065 4.9146735 Eukaryota 2759 unresolved_Eukaryota other_Eukaryota 87 1.66e-17   NR KAJ9453038.1 91374 g23478 i0 48.8 1.47648902821317 80 41 75.2 0 1 240 317 396 KAJ9453038.1 Aspartate aminotransferase [Diplonema papillatum] diamond 471 87.8 0.990888382687927 Eukaryota Discoba   Euglenozoa Diplonemea   Diplonemidae Diplonema Diplonema papillatum
29916839 29916839 PRJNA335774_P_NODE_2451_length_820_cov_2.052209_g2326_i0 PRJNA335774 2451 820 2.052209 16.8281138 Leishmania tarentolae 5689 Euglenozoa other_Eukaryota 57 8.9e-6   NR GET86347.1 5689 g2326 i0 55.8 0.157317073170732 43 19 15.7 0 692 820 37 79 GET86347.1 calmodulin, putative [Leishmania tarentolae] diamond 129 57 1 Eukaryota Discoba   Euglenozoa Kinetoplastea Trypanosomatida Trypanosomatidae Leishmania Leishmania tarentolae
30169237 30169237 PRJNA335774_P_NODE_15152_length_384_cov_1.228296_g15000_i0 PRJNA335774 15152 384 1.228296 4.71665664 Trypanosoma melophagium 715481 Euglenozoa other_Eukaryota 105 5.02e-24   NR XP_067191802.1 715481 g15000 i0 47.5 4.71875 120 55 89.1 2 372 31 185 302 XP_067191802.1 uncharacterized protein LSM04_007764 [Trypanosoma melophagium] diamond 1812 105 1 Eukaryota Discoba   Euglenozoa Kinetoplastea Trypanosomatida Trypanosomatidae Trypanosoma Trypanosoma melophagium
30169269 30169269 PRJNA335774_P_NODE_34952_length_266_cov_1.984456_g34800_i0 PRJNA335774 34952 266 1.984456 5.27865296 Diplonema papillatum 91374 Euglenozoa other_Eukaryota 103 9.379999999999999e-24   NR KAJ9453038.1 91374 g34800 i0 53.8 1.04887218045113 93 38 99.2 2 265 2 217 309 KAJ9453038.1 Aspartate aminotransferase [Diplonema papillatum] diamond 279 103 1 Eukaryota Discoba   Euglenozoa Diplonemea   Diplonemidae Diplonema Diplonema papillatum
30200755 30200755 PRJNA335774_P_NODE_12012_length_425_cov_0.875000_g11860_i0 PRJNA335774 12012 425 0.875 3.71875 Acrasis kona 1008807 Heterolobosea other_Eukaryota 139 1.61e-36   NR KAL0478461.1 1008807 g11860 i0 55.9 0.783529411764706 111 49 78.4 0 52 384 12 122 KAL0478461.1 hypothetical protein AKO1_000409 [Acrasis kona] diamond 333 139 1 Eukaryota Discoba   Heterolobosea     Acrasidae Acrasis Acrasis kona
30391038 30391038 PRJNA335774_P_NODE_23633_length_319_cov_1.520325_g23481_i0 PRJNA335774 23633 319 1.520325 4.84983675 Naegleria lovaniensis 51637 Heterolobosea other_Eukaryota 48.5 6.44e-4   NR XP_044543999.1 51637 g23481 i0 32.9 0.799373040752351 85 55 79.9 2 280 26 5 87 XP_044543999.1 uncharacterized protein C9374_010402 [Naegleria lovaniensis] diamond 255 48.5 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria lovaniensis
30391057 30391057 PRJNA335774_P_NODE_3353_length_724_cov_1.454685_g3215_i0 PRJNA335774 3353 724 1.454685 10.5319194 Diplonema papillatum 91374 Euglenozoa other_Eukaryota 248 4.79e-77   NR KAJ9446193.1 91374 g3215 i0 49.6 1.96408839779006 234 105 97 2 11 712 49 269 KAJ9446193.1 hypothetical protein DIPPA_23822, partial [Diplonema papillatum] diamond 1422 248 1 Eukaryota Discoba   Euglenozoa Diplonemea   Diplonemidae Diplonema Diplonema papillatum
30485439 30485439 PRJNA335774_P_NODE_36813_length_259_cov_1.064516_g36661_i0 PRJNA335774 36813 259 1.064516 2.75709644 Diplonema papillatum 91374 Euglenozoa other_Eukaryota 103 8.66e-24   NR KAJ9453038.1 91374 g36661 i0 54.7 0.996138996138996 86 39 99.6 0 1 258 235 320 KAJ9453038.1 Aspartate aminotransferase [Diplonema papillatum] diamond 258 103 1 Eukaryota Discoba   Euglenozoa Diplonemea   Diplonemidae Diplonema Diplonema papillatum
30516968 30516968 PRJNA335774_P_NODE_30313_length_286_cov_1.084507_g30161_i0 PRJNA335774 30313 286 1.084507 3.10169002 Naegleria fowleri 5763 Heterolobosea other_Eukaryota 45.4 0.00682   NR CAG4719256.1 5763 g30161 i0 42.2 1.34265734265734 64 33 64 2 242 60 181 243 CAG4719256.1 unnamed protein product [Naegleria fowleri] diamond 384 45.4 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria fowleri
30611625 30611625 PRJNA335774_P_NODE_45953_length_243_cov_1.770588_g45801_i0 PRJNA335774 45953 243 1.770588 4.30252884 Perkinsela sp. CCAP 156 1935466 Euglenozoa other_Eukaryota 46.2 0.00215   NR KNH03956.1 1314962 g45801 i0 38.7 0.765432098765432 62 38 76.5 0 2 187 237 298 KNH03956.1 hypothetical protein XU18_4713 [Perkinsela sp. CCAP 1560/4] diamond 186 46.2 1 Eukaryota Discoba   Euglenozoa Kinetoplastea   Ichthyobodonidae Perkinsela Perkinsela sp. CCAP 1560/4
30643202 30643202 PRJNA335774_P_NODE_31833_length_280_cov_0.917874_g31681_i0 PRJNA335774 31833 280 0.917874 2.5700472 Naegleria gruberi 5762 Heterolobosea other_Eukaryota 89.4 2.44e-18   NR XP_002669766.1 5762 g31681 i0 47.3 2.90357142857143 93 49 99.6 0 279 1 163 255 XP_002669766.1 chloride channel ClC-3 [Naegleria gruberi] diamond 813 89.4 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria gruberi
30801247 30801247 PRJNA335774_P_NODE_42934_length_247_cov_0.885057_g42782_i0 PRJNA335774 42934 247 0.885057 2.18609079 Strigomonas culicis 28005 Euglenozoa other_Eukaryota 105 1.52e-25   NR EPY35086.1 28005 g42782 i0 64.6 3.78947368421053 79 22 96 1 10 246 3 75 EPY35086.1 20S proteasome subunit beta 2 [Strigomonas culicis] diamond 936 105 1 Eukaryota Discoba   Euglenozoa Kinetoplastea Trypanosomatida Trypanosomatidae Strigomonas Strigomonas culicis
30864432 30864432 PRJNA335774_P_NODE_354_length_1529_cov_1.822802_g324_i0 PRJNA335774 354 1529 1.822802 27.87064258 Diplonema papillatum 91374 Euglenozoa other_Eukaryota 384 3.08e-125   NR KAJ9458703.1 91374 g324 i0 44.1 0.908436886854153 463 244 88.5 6 1526 174 9 468 KAJ9458703.1 Alpha-L-fucosidase 1 [Diplonema papillatum] diamond 1389 384 1 Eukaryota Discoba   Euglenozoa Diplonemea   Diplonemidae Diplonema Diplonema papillatum
31718171 31718171 PRJNA335774_P_NODE_26957_length_301_cov_1.662281_g26805_i0 PRJNA335774 26957 301 1.662281 5.00346581 Naegleria fowleri 5763 Heterolobosea other_Eukaryota 84 1.45e-18   NR XP_044561642.1 5763 g26805 i0 66.1 0.588039867109635 59 19 57.8 1 177 4 5 63 XP_044561642.1 uncharacterized protein FDP41_004224 [Naegleria fowleri] diamond 177 84 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria fowleri
31956768 31956768 PRJNA335774_P_NODE_23357_length_321_cov_1.012097_g23205_i0 PRJNA335774 23357 321 1.012097 3.24883137 root 1 Root_unresolved Root_unresolved 89 2.22e-18   NR KAL0490907.1 1008807 g23205 i0 48.8 8.41121495327103 84 41 76.6 1 37 282 1 84 KAL0490907.1 RNA-editing ligase 2, mitochondrial [Acrasis kona] diamond 2700 89.4 0.995525727069351 Eukaryota Discoba   Heterolobosea     Acrasidae Acrasis Acrasis kona
32256379 32256379 PRJNA335774_P_NODE_27938_length_297_cov_0.991071_g27786_i0 PRJNA335774 27938 297 0.991071 2.94348087 Diplonema papillatum 91374 Euglenozoa other_Eukaryota 65.5 7.09e-10   NR KAJ9454618.1 91374 g27786 i0 41.6 0.777777777777778 77 41 75.8 3 3 227 164 238 KAJ9454618.1 Methionine synthase [Diplonema papillatum] diamond 231 65.5 1 Eukaryota Discoba   Euglenozoa Diplonemea   Diplonemidae Diplonema Diplonema papillatum
32652265 32652265 PRJNA335774_P_NODE_21120_length_335_cov_0.854962_g20968_i0 PRJNA335774 21120 335 0.854962 2.8641227 Euglenozoa 33682 Euglenozoa other_Eukaryota 45.8 0.00926   NR CUG87118.1 75058 g20968 i0 27.4 1.92537313432836 124 65 97.6 4 5 331 377 490 CUG87118.1 astacin metallopeptidase, putative [Bodo saltans] diamond 645 46.2 0.991341991341991 Eukaryota Discoba   Euglenozoa Kinetoplastea Eubodonida Bodonidae Bodo Bodo saltans

Advanced export

JSON shape: default, array, newline-delimited

CSV options: 

CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;