RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA335774", tax_clade = "Bacteria candidate phyla" and tax_phylum = "Candidatus Bipolaricaulota"

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tax_superkingdom 1

tax_phylum 1

  • Candidatus Bipolaricaulota · 2 ✖

tax_clade 1

  • Bacteria candidate phyla · 2 ✖

bioproject 1

  • PRJNA335774 · 2 ✖

analysis 1

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
29064256 29064256 PRJNA335774_P_NODE_16928_length_367_cov_1.537415_g16776_i0 PRJNA335774 16928 367 1.537415 5.64231305 Candidatus Bipolaricaulota bacterium 2306012 Bacteria Bacteria 59.7 1.43e-7   NR MCK5584544.1 2306012 g16776 i0 45.1 0.580381471389646 71 39 58 0 317 105 239 309 MCK5584544.1 hypothetical protein [Candidatus Bipolaricaulota bacterium] diamond 213 59.7 1 Bacteria Bacteria candidate phyla   Candidatus Bipolaricaulota         Candidatus Bipolaricaulota bacterium
31117021 31117021 PRJNA335774_P_NODE_30175_length_286_cov_2.009390_g30023_i0 PRJNA335774 30175 286 2.00939 5.7468554 Candidatus Bipolaricaulota bacterium 2306012 Bacteria Bacteria 43.1 0.0331   NR MBC7097923.1 2306012 g30023 i0 40 0.576923076923077 55 30 54.5 1 240 85 137 191 MBC7097923.1 MBL fold metallo-hydrolase [Candidatus Bipolaricaulota bacterium] diamond 165 43.1 1 Bacteria Bacteria candidate phyla   Candidatus Bipolaricaulota         Candidatus Bipolaricaulota bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;