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contig_metadata

19 rows where bioproject = "PRJNA335774" and tax_clade = "Amoebozoa"

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tax_phylum 2

analysis 2

tax_superkingdom 1

tax_clade 1

  • Amoebozoa · 19 ✖

bioproject 1

  • PRJNA335774 · 19 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
5493713 5493713 PRJNA335774_P_NODE_19725_length_344_cov_1.409594_g19573_i0 PRJNA335774 19725 344 1.409594 4.84900336 Cavenderia fasciculata 261658 Evosea other_Eukaryota 54.7 0.009   NTclustered gi|470244313|ref|XM_004355836.1| 261658 g19573 i0 96.97 0.0959302325581395 33 0 10 1 218 250 624 655 Cavenderia fasciculata uncharacterized protein (DFA_08400), partial mRNA blastn 33 54.7 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Acytosteliales Cavenderiaceae Cavenderia Cavenderia fasciculata
19515930 19515930 PRJNA335774_P_NODE_16056_length_375_cov_1.019868_g15904_i0 PRJNA335774 16056 375 1.019868 3.824505 Acytostelium subglobosum 361139 Evosea other_Eukaryota 54.7 0.01   NTclustered gi|831777038|ref|XM_012899530.1| 1410327 g15904 i0 96.97 1.05866666666667 33 0 9 1 187 218 717 685 Acytostelium subglobosum LB1 hypothetical protein partial mRNA blastn 397 54.7 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Acytosteliales Acytosteliaceae Acytostelium Acytostelium subglobosum
22066728 22066728 PRJNA335774_P_NODE_24738_length_313_cov_1.908333_g24586_i0 PRJNA335774 24738 313 1.908333 5.97308229 Heterostelium album 2086695 Evosea other_Eukaryota 62.1 4.86e-5   NTclustered gi|1160563410|ref|XM_020579920.1| 670386 g24586 i0 100 5.49840255591054 33 0 11 0 146 178 853 821 Polysphondylium pallidum PN500 hypothetical protein partial mRNA blastn 1721 62.1 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Acytosteliales Acytosteliaceae Heterostelium Heterostelium album
27169233 27169233 PRJNA335774_P_NODE_382_length_1508_cov_5.052265_g352_i0 PRJNA335774 382 1508 5.052265 76.1881562 Physarum polycephalum 5791 Evosea other_Eukaryota 213 1.66e-62   NR ABD72560.1 5791 g352 i0 54.3 0.417771883289125 210 90 41 3 697 1314 1 208 ABD72560.1 chitinase-like protein cluster D, partial [Physarum polycephalum] diamond 630 213 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Physariida Physaraceae Physarum Physarum polycephalum
27801280 27801280 PRJNA335774_P_NODE_22024_length_329_cov_0.902344_g21872_i0 PRJNA335774 22024 329 0.902344 2.96871176 Cavenderia fasciculata 261658 Evosea other_Eukaryota 77.8 4.86e-14   NR XP_004352426.1 261658 g21872 i0 54.4 1.44072948328267 79 35 71.1 1 329 96 434 512 XP_004352426.1 histidase [Cavenderia fasciculata] diamond 474 77.8 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Acytosteliales Cavenderiaceae Cavenderia Cavenderia fasciculata
28401090 28401090 PRJNA335774_P_NODE_41746_length_248_cov_0.880000_g41594_i0 PRJNA335774 41746 248 0.88 2.1824 Dictyostelium purpureum 5786 Evosea other_Eukaryota 52.8 1.15e-5   NR 4R12_A 5786 g41594 i0 45.5 3.30241935483871 55 30 66.5 0 74 238 10 64 4R12_A Chain A, Crystal structure of the gamma-secretase component Nicastrin [Dictyostelium purpureum] diamond 819 52.8 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Dictyosteliales Dictyosteliaceae Dictyostelium Dictyostelium purpureum
29284994 29284994 PRJNA335774_P_NODE_2969_length_762_cov_1.538462_g2838_i0 PRJNA335774 2969 762 1.538462 11.72308044 Acytostelium subglobosum LB1 1410327 Evosea other_Eukaryota 196 7.41e-58   NR XP_012753259.1 1410327 g2838 i0 54.8 1.30314960629921 166 75 65.4 0 761 264 133 298 XP_012753259.1 hypothetical protein SAMD00019534_066930, partial [Acytostelium subglobosum LB1] diamond 993 196 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Acytosteliales Acytosteliaceae Acytostelium Acytostelium subglobosum
29569243 29569243 PRJNA335774_P_NODE_2750_length_783_cov_2.026761_g2621_i0 PRJNA335774 2750 783 2.026761 15.86953863 Physarum polycephalum 5791 Evosea other_Eukaryota 202 2.23e-61   NR ABD72560.1 5791 g2621 i0 51 0.804597701149425 210 97 78.9 3 155 772 1 208 ABD72560.1 chitinase-like protein cluster D, partial [Physarum polycephalum] diamond 630 202 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Physariida Physaraceae Physarum Physarum polycephalum
29790147 29790147 PRJNA335774_P_NODE_12511_length_417_cov_1.218023_g12359_i0 PRJNA335774 12511 417 1.218023 5.07915591 Pelomyxa schiedti 1580589 Evosea other_Eukaryota 127 8.989999999999998e-32   NR KAH3757913.1 1580589 g12359 i0 48.1 0.928057553956835 129 61 88.5 1 32 400 202 330 KAH3757913.1 Pectinacetylesterase family protein [Pelomyxa schiedti] diamond 387 127 1 Eukaryota Amoebozoa   Evosea   Pelobiontida Pelomyxidae Pelomyxa Pelomyxa schiedti
30074459 30074459 PRJNA335774_P_NODE_29952_length_287_cov_1.771028_g29800_i0 PRJNA335774 29952 287 1.771028 5.08285036 Acanthamoeba castellanii str. Neff 1257118 Discosea other_Eukaryota 104 6.13e-25   NR XP_004340861.1 1257118 g29800 i0 61.7 2.47735191637631 81 31 84.7 0 263 21 123 203 XP_004340861.1 actin subfamily protein [Acanthamoeba castellanii str. Neff] diamond 711 104 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
30074479 30074479 PRJNA335774_P_NODE_44952_length_245_cov_0.895349_g44800_i0 PRJNA335774 44952 245 0.895349 2.19360505 Planoprotostelium fungivorum 1890364 Evosea other_Eukaryota 61.6 8.33e-9   NR PRP87179.1 1890364 g44800 i0 63.4 0.502040816326531 41 15 50.2 0 170 48 210 250 PRP87179.1 phytanoyl-CoA dioxygenase [Planoprotostelium fungivorum] diamond 123 61.6 1 Eukaryota Amoebozoa   Evosea Variosea Cavosteliida Cavosteliaceae Planoprotostelium Planoprotostelium fungivorum
30359471 30359471 PRJNA335774_P_NODE_2032_length_878_cov_1.554037_g1919_i0 PRJNA335774 2032 878 1.554037 13.64444486 Acanthamoeba castellanii str. Neff 1257118 Discosea other_Eukaryota 371 8.950000000000001e-123   NR XP_004358245.1 1257118 g1919 i0 63.4 1.98519362186788 292 96 98.4 3 10 873 1 285 XP_004358245.1 transcriptional regulator, Sir2 family protein [Acanthamoeba castellanii str. Neff] diamond 1743 371 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
30391084 30391084 PRJNA335774_P_NODE_9553_length_468_cov_1.455696_g9401_i0 PRJNA335774 9553 468 1.455696 6.81265728 Pelomyxa schiedti 1580589 Evosea other_Eukaryota 59.3 6.55e-7   NR KAH3758050.1 1580589 g9401 i0 32.8 0.878205128205128 137 79 85.9 5 36 437 580 706 KAH3758050.1 Oligo alginate lyase [Pelomyxa schiedti] diamond 411 59.3 1 Eukaryota Amoebozoa   Evosea   Pelobiontida Pelomyxidae Pelomyxa Pelomyxa schiedti
31054399 31054399 PRJNA335774_P_NODE_3055_length_753_cov_2.202941_g2923_i0 PRJNA335774 3055 753 2.202941 16.58814573 Physarum polycephalum 5791 Evosea other_Eukaryota 117 3.36e-28   NR ABD72560.1 5791 g2923 i0 52.1 0.474103585657371 119 56 47 1 36 389 90 208 ABD72560.1 chitinase-like protein cluster D, partial [Physarum polycephalum] diamond 357 117 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Physariida Physaraceae Physarum Physarum polycephalum
31180151 31180151 PRJNA335774_P_NODE_36355_length_261_cov_0.978723_g36203_i0 PRJNA335774 36355 261 0.978723 2.55446703 Dictyostelium discoideum AX4 352472 Evosea other_Eukaryota 62.8 4.09e-9   NR XP_641462.1 352472 g36203 i0 39.8 0.954022988505747 83 40 83.9 3 221 3 714 796 XP_641462.1 hypothetical protein DDB_G0280007 [Dictyostelium discoideum AX4] diamond 249 62.8 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Dictyosteliales Dictyosteliaceae Dictyostelium Dictyostelium discoideum
31402019 31402019 PRJNA335774_P_NODE_11736_length_428_cov_2.614085_g11584_i0 PRJNA335774 11736 428 2.614085 11.1882838 Heterostelium album PN5 2086695 Evosea other_Eukaryota 144 8.499999999999998e-39   NR XP_020434270.1 670386 g11584 i0 54.1 2.81775700934579 133 61 93.2 0 29 427 28 160 XP_020434270.1 putative delta-24-sterol methyltransferase [Heterostelium album PN500] diamond 1206 144 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Acytosteliales Acytosteliaceae Heterostelium Heterostelium album
31465348 31465348 PRJNA335774_P_NODE_29876_length_288_cov_1.069767_g29724_i0 PRJNA335774 29876 288 1.069767 3.08092896 Acytostelium subglobosum LB1 1410327 Evosea other_Eukaryota 87.4 3.08e-18   NR XP_012755276.1 1410327 g29724 i0 47.9 1.95833333333333 94 49 97.9 0 2 283 138 231 XP_012755276.1 hypothetical protein SAMD00019534_053510, partial [Acytostelium subglobosum LB1] diamond 564 87.4 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Acytosteliales Acytosteliaceae Acytostelium Acytostelium subglobosum
31907917 31907917 PRJNA335774_P_NODE_14597_length_390_cov_1.208202_g14445_i0 PRJNA335774 14597 390 1.208202 4.7119878 Acanthamoeba castellanii str. Neff 1257118 Discosea other_Eukaryota 66.2 9.86e-10   NR XP_004367869.1 1257118 g14445 i0 52.1 0.546153846153846 71 32 53.1 1 2 208 288 358 XP_004367869.1 transcriptional regulator, Sir2 family protein [Acanthamoeba castellanii str. Neff] diamond 213 66.2 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
32477695 32477695 PRJNA335774_P_NODE_899_length_1185_cov_2.170863_g843_i0 PRJNA335774 899 1185 2.170863 25.72472655 Entamoeba invadens IP1 370355 Evosea other_Eukaryota 70.5 7.67e-9   NR XP_004259119.1 370355 g843 i0 26.8 1.6 284 132 66.8 16 1086 295 647 874 XP_004259119.1 A2L zinc ribbon domain containing protein, partial [Entamoeba invadens IP1] diamond 1896 70.5 1 Eukaryota Amoebozoa   Evosea   Mastigamoebida Entamoebidae Entamoeba Entamoeba invadens

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;