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contig_metadata

20 rows where bioproject = "PRJNA330616", tax_phylum = "Acidobacteriota" and tax_superkingdom = "Bacteria"

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analysis 2

tax_superkingdom 1

  • Bacteria · 20 ✖

tax_phylum 1

  • Acidobacteriota · 20 ✖

tax_kingdom 1

bioproject 1

  • PRJNA330616 · 20 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
389644 389644 PRJNA330616_P_NODE_18661_length_195_cov_1.356164_g18252_i0 PRJNA330616 18661 195 1.356164 2.6445198 Pseudomonadati 3379134 Bacteria Bacteria 75.1 7.7e-14   NR HZQ70140.1 2282142 g18252 i0 56.7 6.66153846153846 60 25 90.8 1 3 179 2906 2965 HZQ70140.1 amino acid adenylation domain-containing protein [Terriglobales bacterium] diamond 1299 75.1 1 Bacteria   Pseudomonadati Acidobacteriota Terriglobia Terriglobales     Terriglobales bacterium
1069366 1069366 PRJNA330616_P_NODE_23321_length_175_cov_1.365079_g22912_i0 PRJNA330616 23321 175 1.365079 2.38888825 Pseudomonadati 3379134 Bacteria Bacteria 122 1.1099999999999999e-23   NTclustered gi|2621701418|emb|OY760136.1| 2910147 g22912 i0 79.885 27.6971428571429 174 29 98 6 1 171 1699524 1699354 MAG: Vicinamibacterales bacterium isolate f9e760c9-8bbe-4e76-9a0a-40d6f1fb97b8 genome assembly, chromosome: 1 blastn 4847 122 1 Bacteria   Pseudomonadati Acidobacteriota Vicinamibacteria Vicinamibacterales     Vicinamibacterales bacterium
1664537 1664537 PRJNA330616_P_NODE_5542_length_357_cov_1.902597_g5133_i0 PRJNA330616 5542 357 1.902597 6.79227129 Acidobacteriota bacterium 1978231 Bacteria Bacteria 462 1.32e-125   NTclustered gi|1958085512|gb|CP065000.1| 1978231 g5133 i0 90.028 107.137254901961 361 31 100 4 1 357 3300016 3299657 Acidobacteria bacterium isolate Kalu_18-Q3-R12-55_MAXAC.078_cln chromosome, complete genome blastn 38248 462 1 Bacteria   Pseudomonadati Acidobacteriota         Acidobacteriota bacterium
2940347 2940347 PRJNA330616_P_NODE_23723_length_173_cov_2.411290_g23314_i0 PRJNA330616 23723 173 2.41129 4.1715317 Acidobacteriota bacterium 1978231 Bacteria Bacteria 222 1.05e-53   NTclustered gi|1958085512|gb|CP065000.1| 1978231 g23314 i0 90.173 90.757225433526 173 14 100 3 1 173 3298705 3298874 Acidobacteria bacterium isolate Kalu_18-Q3-R12-55_MAXAC.078_cln chromosome, complete genome blastn 15701 222 1 Bacteria   Pseudomonadati Acidobacteriota         Acidobacteriota bacterium
11868438 11868438 PRJNA330616_P_NODE_30690_length_162_cov_1.398230_g30281_i0 PRJNA330616 30690 162 1.39823 2.2651326 Acidobacteriota bacterium 1978231 Bacteria Bacteria 215 1.62e-51   NTclustered gi|1958093598|gb|CP065003.1| 1978231 g30281 i0 92.667 67.3641975308642 150 10 92 1 1 149 317262 317411 Acidobacteria bacterium isolate Kalu_18-Q3-R12-55_MAXAC.185_cln chromosome, complete genome blastn 10913 215 1 Bacteria   Pseudomonadati Acidobacteriota         Acidobacteriota bacterium
16967232 16967232 PRJNA330616_P_NODE_7094_length_313_cov_1.488636_g6685_i0 PRJNA330616 7094 313 1.488636 4.65943068 Vicinamibacterales bacterium 2910147 Bacteria Bacteria 193 1.65e-44   NTclustered gi|2621701418|emb|OY760136.1| 2910147 g6685 i0 80.224 72.6932907348243 268 43 84 10 50 313 1699525 1699264 MAG: Vicinamibacterales bacterium isolate f9e760c9-8bbe-4e76-9a0a-40d6f1fb97b8 genome assembly, chromosome: 1 blastn 22753 193 1 Bacteria   Pseudomonadati Acidobacteriota Vicinamibacteria Vicinamibacterales     Vicinamibacterales bacterium
19515668 19515668 PRJNA330616_P_NODE_31276_length_162_cov_0.902655_g30867_i0 PRJNA330616 31276 162 0.902655 1.4623011 uncultured Acidobacteriota bacterium 171953 Bacteria Bacteria 147 6.009999999999999e-31   NTclustered gi|2874253885|emb|OY970060.1| 171953 g30867 i0 85.714 5.09259259259259 140 18 86 2 24 162 2282265 2282127 MAG: uncultured Acidobacteriota bacterium isolate MFD01916.bin.c.4 genome assembly, chromosome: 1 blastn 825 147 1 Bacteria   Pseudomonadati Acidobacteriota         uncultured Acidobacteriota bacterium
19515735 19515735 PRJNA330616_P_NODE_6576_length_326_cov_1.018051_g6167_i0 PRJNA330616 6576 326 1.018051 3.31884626 uncultured Acidobacteriota bacterium 171953 Bacteria Bacteria 357 5.8e-94   NTclustered gi|217038907|gb|EU810998.1| 171953 g6167 i0 93.361 220.69018404908 241 16 74 0 86 326 1 241 Uncultured Acidobacteria bacterium clone 01QCK 23S ribosomal RNA gene, partial sequence blastn 71945 357 1 Bacteria   Pseudomonadati Acidobacteriota         uncultured Acidobacteriota bacterium
24615599 24615599 PRJNA330616_P_NODE_11220_length_247_cov_1.262626_g10811_i0 PRJNA330616 11220 247 1.262626 3.11868622 uncultured Acidobacteriota bacterium 171953 Bacteria Bacteria 265 2.63e-66   NTclustered gi|2874253692|emb|OY969418.1| 171953 g10811 i0 86 163.514170040486 250 32 100 2 1 247 4233619 4233868 MAG: uncultured Acidobacteriota bacterium isolate MFD09212.bin.c.1 genome assembly, chromosome: 1 blastn 40388 265 1 Bacteria   Pseudomonadati Acidobacteriota         uncultured Acidobacteriota bacterium
27485436 27485436 PRJNA330616_P_NODE_31123_length_162_cov_0.902655_g30714_i0 PRJNA330616 31123 162 0.902655 1.4623011 Acidobacteriota bacterium 1978231 Bacteria Bacteria 57 5.34e-9   NR MBK9061592.1 1978231 g30714 i0 57.1 2.62962962962963 49 20 90.7 1 155 9 6 53 MBK9061592.1 hypothetical protein [Acidobacteriota bacterium] diamond 426 57 1 Bacteria   Pseudomonadati Acidobacteriota         Acidobacteriota bacterium
27692398 27692398 PRJNA330616_P_NODE_16224_length_208_cov_1.283019_g15815_i0 PRJNA330616 16224 208 1.283019 2.66867952 Pseudomonadati 3379134 Bacteria Bacteria 93.2 5.51e-21   NR MEW5980043.1 1978231 g15815 i0 65.2 26.8701923076923 69 24 99.5 0 1 207 25 93 MEW5980043.1 aldolase/citrate lyase family protein [Acidobacteriota bacterium] diamond 5589 94 0.991489361702128 Bacteria   Pseudomonadati Acidobacteriota         Acidobacteriota bacterium
28874610 28874610 PRJNA330616_P_NODE_28748_length_164_cov_0.886957_g28339_i0 PRJNA330616 28748 164 0.886957 1.45460948 Pyrinomonadaceae bacterium 2283092 Bacteria Bacteria 80.1 6.13e-16   NR MEQ1923763.1 2283092 g28339 i0 71.7 0.969512195121951 53 15 97 0 159 1 97 149 MEQ1923763.1 CHRD domain-containing protein [Pyrinomonadaceae bacterium] diamond 159 80.1 1 Bacteria   Pseudomonadati Acidobacteriota Blastocatellia Blastocatellales Pyrinomonadaceae   Pyrinomonadaceae bacterium
29459972 29459972 PRJNA330616_P_NODE_6150_length_338_cov_1.570934_g5741_i0 PRJNA330616 6150 338 1.570934 5.30975692 Pseudomonadati 3379134 Bacteria Bacteria 97.1 1.07e-20   NR MCU1268103.1 1978231 g5741 i0 48.2 9.94082840236686 112 58 99.4 0 3 338 1425 1536 MCU1268103.1 putative linear pentadecapeptide gramicidin synthetase LgrB [Acidobacteriota bacterium] diamond 3360 97.1 1 Bacteria   Pseudomonadati Acidobacteriota         Acidobacteriota bacterium
29965615 29965615 PRJNA330616_P_NODE_21991_length_180_cov_1.557252_g21582_i0 PRJNA330616 21991 180 1.557252 2.8030536 Bacteria 2 Bacteria Bacteria 49.3 7.69e-5   NR MEM9554443.1 1978231 g21582 i0 46.8 2.06666666666667 62 30 98.3 2 2 178 48 109 MEM9554443.1 peroxidase family protein [Acidobacteriota bacterium] diamond 372 49.3 1 Bacteria   Pseudomonadati Acidobacteriota         Acidobacteriota bacterium
30232563 30232563 PRJNA330616_P_NODE_19592_length_190_cov_2.085106_g19183_i0 PRJNA330616 19592 190 2.085106 3.9617014 Geothrix limicola 2927978 Bacteria Bacteria 90.1 2.68e-20   NR WP_285576367.1 2927978 g19183 i0 70.3 1.01052631578947 64 17 97.9 1 4 189 25 88 WP_285576367.1 CatB-related O-acetyltransferase [Geothrix limicola] diamond 192 90.1 1 Bacteria   Pseudomonadati Acidobacteriota Holophagae Holophagales Holophagaceae Geothrix Geothrix limicola
30628812 30628812 PRJNA330616_P_NODE_26733_length_166_cov_0.871795_g26324_i0 PRJNA330616 26733 166 0.871795 1.4471797 Pseudomonadati 3379134 Bacteria Bacteria 44.7 0.00283   NR SPF32762.1 2043165 g26324 i0 52.9 4.60843373493976 51 15 90.4 2 166 17 1164 1206 SPF32762.1 exported hypothetical protein [Candidatus Sulfopaludibacter sp. SbA4] diamond 765 45.1 0.991130820399113 Bacteria   Pseudomonadati Acidobacteriota Terriglobia Bryobacterales Solibacteraceae Candidatus Sulfopaludibacter Candidatus Sulfopaludibacter sp. SbA4
31813011 31813011 PRJNA330616_P_NODE_26957_length_166_cov_0.871795_g26548_i0 PRJNA330616 26957 166 0.871795 1.4471797 Acidobacteriota bacterium 1978231 Bacteria Bacteria 105 1.38e-24   NR MBI4850196.1 1978231 g26548 i0 88.9 0.975903614457831 54 6 97.6 0 3 164 526 579 MBI4850196.1 TonB-dependent siderophore receptor [Acidobacteriota bacterium] diamond 162 105 1 Bacteria   Pseudomonadati Acidobacteriota         Acidobacteriota bacterium
32002877 32002877 PRJNA330616_P_NODE_20098_length_188_cov_1.467626_g19689_i0 PRJNA330616 20098 188 1.467626 2.75913688 Vicinamibacterales bacterium 2910147 Bacteria Bacteria 49.3 7.68e-5   NR HEU4893770.1 2910147 g19689 i0 61.8 1.08510638297872 34 13 54.3 0 86 187 5 38 HEU4893770.1 glycosyltransferase [Vicinamibacterales bacterium] diamond 204 49.3 1 Bacteria   Pseudomonadati Acidobacteriota Vicinamibacteria Vicinamibacterales     Vicinamibacterales bacterium
32051781 32051781 PRJNA330616_P_NODE_11098_length_248_cov_1.793970_g10689_i0 PRJNA330616 11098 248 1.79397 4.4490456 root 1 Root_unresolved Root_unresolved 108 3.21e-25   NR HEV8590257.1 2283092 g10689 i0 65 13.6209677419355 80 28 96.8 0 243 4 292 371 HEV8590257.1 non-ribosomal peptide synthetase [Pyrinomonadaceae bacterium] diamond 3378 109 0.990825688073395 Bacteria   Pseudomonadati Acidobacteriota Blastocatellia Blastocatellales Pyrinomonadaceae   Pyrinomonadaceae bacterium
32477628 32477628 PRJNA330616_P_NODE_22799_length_177_cov_1.429688_g22390_i0 PRJNA330616 22799 177 1.429688 2.53054776 Thermoanaerobaculia bacterium 2651171 Bacteria Bacteria 51.6 1.13e-5   NR MCK6691006.1 2651171 g22390 i0 41.1 2.89830508474576 56 31 94.9 1 176 9 88 141 MCK6691006.1 ABC transporter permease [Thermoanaerobaculia bacterium] diamond 513 51.6 1 Bacteria   Pseudomonadati Acidobacteriota Thermoanaerobaculia       Thermoanaerobaculia bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;