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contig_metadata

12 rows where bioproject = "PRJNA330616", tax_kingdom = "Pseudomonadati" and tax_phylum = "Bdellovibrionota"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Bdellovibrionota · 12 ✖

tax_kingdom 1

  • Pseudomonadati · 12 ✖

bioproject 1

  • PRJNA330616 · 12 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
389739 389739 PRJNA330616_P_NODE_26201_length_167_cov_0.864407_g25792_i0 PRJNA330616 26201 167 0.864407 1.44355969 Bdellovibrio bacteriovorus 959 Bacteria Bacteria 196 6.12e-46   NTclustered gi|2800920897|gb|CP168968.1| 959 g25792 i0 88.75 7.25149700598802 160 18 96 0 1 160 1808663 1808822 Bdellovibrio bacteriovorus strain Bd5 chromosome, complete genome blastn 1211 196 1 Bacteria   Pseudomonadati Bdellovibrionota Bdellovibrionia Bdellovibrionales Pseudobdellovibrionaceae Bdellovibrio Bdellovibrio bacteriovorus
2344699 2344699 PRJNA330616_P_NODE_30462_length_163_cov_0.894737_g30053_i0 PRJNA330616 30462 163 0.894737 1.45842131 Pseudomonadati 3379134 Bacteria Bacteria 99 1.72e-16   NTclustered gi|2800914199|gb|CP168971.1| 959 g30053 i0 87.209 19.6319018404908 86 11 53 0 59 144 3049418 3049503 Bdellovibrio bacteriovorus strain Bd16 chromosome, complete genome blastn 3200 99 1 Bacteria   Pseudomonadati Bdellovibrionota Bdellovibrionia Bdellovibrionales Pseudobdellovibrionaceae Bdellovibrio Bdellovibrio bacteriovorus
2940334 2940334 PRJNA330616_P_NODE_22723_length_177_cov_1.593750_g22314_i0 PRJNA330616 22723 177 1.59375 2.8209375 Spirobacillus cienkowskii 495820 Bacteria Bacteria 100 5.27e-17   NTclustered gi|2696024138|gb|CP146516.1| 495820 g22314 i0 96.667 31.4689265536723 60 2 36 0 118 177 385944 385885 Spirobacillus cienkowskii strain FI-SP1 chromosome, complete genome blastn 5570 100 1 Bacteria   Pseudomonadati Bdellovibrionota Oligoflexia Silvanigrellales   Spirobacillus Spirobacillus cienkowskii
7447141 7447141 PRJNA330616_P_NODE_15166_length_214_cov_1.854545_g14757_i0 PRJNA330616 15166 214 1.854545 3.9687263 Micavibrio 213485 Bacteria Bacteria 241 3.75e-59   NTclustered gi|469926873|gb|CP003538.1| 349215 g14757 i0 87.097 479.845794392523 217 23 100 5 1 214 463023 462809 Micavibrio aeruginosavorus EPB, complete genome blastn 102687 241 1 Bacteria   Pseudomonadati Bdellovibrionota Bdellovibrionia Bdellovibrionales Pseudobdellovibrionaceae Micavibrio Micavibrio aeruginosavorus
10593502 10593502 PRJNA330616_P_NODE_31389_length_162_cov_0.902655_g30980_i0 PRJNA330616 31389 162 0.902655 1.4623011 Bdellovibrio sp. qaytius 1916293 Bacteria Bacteria 217 4.5199999999999996e-52   NTclustered gi|1552089877|gb|CP025734.1| 1916293 g30980 i0 91.72 8.82716049382716 157 11 96 2 7 162 665743 665588 Bdellovibrio sp. qaytius chromosome, complete genome blastn 1430 217 1 Bacteria   Pseudomonadati Bdellovibrionota Bdellovibrionia Bdellovibrionales Pseudobdellovibrionaceae Bdellovibrio Bdellovibrio sp. qaytius
11272536 11272536 PRJNA330616_P_NODE_22189_length_179_cov_1.961538_g21780_i0 PRJNA330616 22189 179 1.961538 3.51115302 Bdellovibrio 958 Bacteria Bacteria 193 8.56e-45   NTclustered gi|2800914199|gb|CP168971.1| 959 g21780 i0 89.542 52.340782122905 153 14 84 2 29 179 753178 753026 Bdellovibrio bacteriovorus strain Bd16 chromosome, complete genome blastn 9369 193 1 Bacteria   Pseudomonadati Bdellovibrionota Bdellovibrionia Bdellovibrionales Pseudobdellovibrionaceae Bdellovibrio Bdellovibrio bacteriovorus
12547895 12547895 PRJNA330616_P_NODE_24790_length_169_cov_1.775000_g24381_i0 PRJNA330616 24790 169 1.775 2.99975 Peredibacter 263370 Bacteria Bacteria 313 5.859999999999999e-81   NTclustered gi|2631252187|gb|CP139487.1| 28202 g24381 i0 100 201.153846153846 169 0 100 0 1 169 511232 511400 Peredibacter starrii strain A3.12 chromosome, complete genome blastn 33995 313 1 Bacteria   Pseudomonadati Bdellovibrionota Bacteriovoracia Bacteriovoracales Bacteriovoracaceae Peredibacter Peredibacter starrii
16967073 16967073 PRJNA330616_P_NODE_25474_length_167_cov_1.296610_g25065_i0 PRJNA330616 25474 167 1.29661 2.1653387 Bdellovibrio sp. HCB337 3394358 Bacteria Bacteria 158 2.89e-34   NTclustered gi|2895525383|gb|CP178621.1| 3394358 g25065 i0 83.929 382.095808383234 168 23 100 4 1 167 3447869 3448033 Bdellovibrio sp. HCB337 chromosome, complete genome blastn 63810 158 1 Bacteria   Pseudomonadati Bdellovibrionota Bdellovibrionia Bdellovibrionales Pseudobdellovibrionaceae Bdellovibrio Bdellovibrio sp. HCB337
24615965 24615965 PRJNA330616_P_NODE_4040_length_426_cov_2.710875_g3632_i0 PRJNA330616 4040 426 2.710875 11.5483275 Pseudobdellovibrio sp. HCB154 3386277 Bacteria Bacteria 749 0   NTclustered gi|2872995934|gb|CP176530.1| 3386277 g3632 i0 98.357 181.037558685446 426 7 100 0 1 426 699454 699879 Pseudobdellovibrio sp. HCB154 chromosome, complete genome blastn 77122 749 1 Bacteria   Pseudomonadati Bdellovibrionota Bdellovibrionia Bdellovibrionales Pseudobdellovibrionaceae Pseudobdellovibrio Pseudobdellovibrio sp. HCB154
31401998 31401998 PRJNA330616_P_NODE_16936_length_204_cov_0.954839_g16527_i0 PRJNA330616 16936 204 0.954839 1.94787156 Bdellovibrio reynosensis 2835041 Bacteria Bacteria 47 5.99e-4   NR WP_243537368.1 2835041 g16527 i0 38.7 2.44117647058824 62 27 89.7 2 2 184 92 143 WP_243537368.1 DUF5602 domain-containing protein [Bdellovibrio reynosensis] diamond 498 47 1 Bacteria   Pseudomonadati Bdellovibrionota Bdellovibrionia Bdellovibrionales Pseudobdellovibrionaceae Bdellovibrio Bdellovibrio reynosensis
32192778 32192778 PRJNA330616_P_NODE_31978_length_161_cov_0.910714_g31569_i0 PRJNA330616 31978 161 0.910714 1.46624954 Silvanigrellaceae bacterium 2654442 Bacteria Bacteria 110 9.87e-28   NR MBX9702590.1 2654442 g31569 i0 66.7 1.45341614906832 78 1 98.8 1 2 160 117 194 MBX9702590.1 serine/threonine-protein kinase [Silvanigrellaceae bacterium] diamond 234 110 1 Bacteria   Pseudomonadati Bdellovibrionota Oligoflexia Silvanigrellales Silvanigrellaceae   Silvanigrellaceae bacterium
32287969 32287969 PRJNA330616_P_NODE_8859_length_278_cov_14.855895_g8450_i0 PRJNA330616 8859 278 14.855895 41.2993881 Bdellovibrionota bacterium 3034175 Bacteria Bacteria 43.5 0.0306   NR MEE2745177.1 3034175 g8450 i0 33.3 1.10071942446043 78 44 77.7 3 223 8 636 711 MEE2745177.1 penicillin acylase family protein [Bdellovibrionota bacterium] diamond 306 43.5 1 Bacteria   Pseudomonadati Bdellovibrionota         Bdellovibrionota bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;