RNAquarium Metadata Server
Institute Website Terms of Use Privacy Policy

contig_metadata

14 rows where bioproject = "PRJNA330616" and tax_kingdom = "Orthornavirae"

✎ View and edit SQL

This data as json, CSV (advanced)

analysis 2

tax_superkingdom 1

tax_kingdom 1

  • Orthornavirae · 14 ✖

bioproject 1

  • PRJNA330616 · 14 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
5493282 5493282 PRJNA330616_P_NODE_26085_length_167_cov_0.864407_g25676_i0 PRJNA330616 26085 167 0.864407 1.44355969 Chrocurosk virus 3129322 Viruses Viruses 213 6.07e-51   NTclustered gi|2717317280|gb|PP171770.1| 3129322 g25676 i0 91.25 309.377245508982 160 8 93 6 2 157 1662 1819 MAG: Chrocurosk virus isolate CC1A_k141_129357 genomic sequence blastn 51666 213 1 Viruses   Orthornavirae Duplornaviricota Chrymotiviricetes Ghabrivirales Totiviridae   Chrocurosk virus
13143453 13143453 PRJNA330616_P_NODE_8491_length_284_cov_5.391489_g8082_i0 PRJNA330616 8491 284 5.391489 15.31182876 Sopidub virus 3131684 Viruses Viruses 141 5.44e-29   NTclustered gi|2717323145|gb|PP173985.1| 3131684 g8082 i0 88.136 10.6901408450704 118 14 42 0 5 122 2262 2145 MAG: Sopidub virus isolate SP1B_k141_213983 genomic sequence blastn 3036 141 1 Viruses   Orthornavirae Pisuviricota Duplopiviricetes Durnavirales Picobirnaviridae   Sopidub virus
22066097 22066097 PRJNA330616_P_NODE_22158_length_179_cov_3.530769_g21749_i0 PRJNA330616 22158 179 3.530769 6.32007651 Potexvirus trifolii 3433859 Viruses Viruses 292 8.210000000000001e-75   NTclustered gi|1843793423|gb|MN399742.1| 12188 g21749 i0 96.089 14.2849162011173 179 7 100 0 1 179 2822 2644 White clover mosaic virus isolate Kreis Stormarn_18 RNA replication protein, triple gene block protein 1, triple gene block protein 2, triple gene block protein 3, and coat protein genes, complete cds blastn 2557 292 1 Viruses   Orthornavirae Kitrinoviricota Alsuviricetes Tymovirales Alphaflexiviridae Potexvirus Potexvirus trifolii
22066258 22066258 PRJNA330616_P_NODE_31958_length_161_cov_0.910714_g31549_i0 PRJNA330616 31958 161 0.910714 1.46624954 Bromovirus BMV 3427622 Viruses Viruses 292 7.24e-75   NTclustered gi|2239525971|gb|MW568013.1| 12302 g31549 i0 99.379 34.9627329192547 161 1 100 0 1 161 1108 948 Brome mosaic virus isolate BMV-PK RdRp polymerase gene, complete cds blastn 5629 292 1 Viruses   Orthornavirae Kitrinoviricota Alsuviricetes Martellivirales Bromoviridae Bromovirus Bromovirus BMV
28211420 28211420 PRJNA330616_P_NODE_6746_length_322_cov_1.164835_g6337_i0 PRJNA330616 6746 322 1.164835 3.7507687 Narnaviridae sp. 2583949 Viruses Viruses 116 9.23e-28   NR URG16935.1 2583949 g6337 i0 57.3 2.76708074534162 103 42 96 1 6 314 228 328 URG16935.1 MAG: RNA dependent RNA polymerase, partial [Narnaviridae sp.] diamond 891 116 1 Viruses   Orthornavirae Lenarviricota Amabiliviricetes Wolframvirales Narnaviridae   Narnaviridae sp.
28527568 28527568 PRJNA330616_P_NODE_8367_length_287_cov_1.226891_g7958_i0 PRJNA330616 8367 287 1.226891 3.52117717 Narnaviridae sp. 2583949 Viruses Viruses 67 1.81e-10   NR URG16933.1 2583949 g7958 i0 39.8 3.13588850174216 98 56 99.3 1 1 285 459 556 URG16933.1 MAG: RNA dependent RNA polymerase, partial [Narnaviridae sp.] diamond 900 67 1 Viruses   Orthornavirae Lenarviricota Amabiliviricetes Wolframvirales Narnaviridae   Narnaviridae sp.
29506044 29506044 PRJNA330616_P_NODE_6230_length_336_cov_1.212544_g5821_i0 PRJNA330616 6230 336 1.212544 4.07414784 Fusarium culmorum yue-like virus 1 3233859 Viruses Viruses 66.2 6.51e-10   NR XCO56027.1 3233859 g5821 i0 34.5 0.982142857142857 110 66 92.9 1 333 22 495 604 XCO56027.1 MAG: putative RNA-dependent RNA polymerase [Fusarium culmorum yue-like virus 1] diamond 330 66.2 1 Viruses   Orthornavirae Negarnaviricota Yunchangviricetes Goujianvirales Yueviridae   Fusarium culmorum yue-like virus 1
29663641 29663641 PRJNA330616_P_NODE_29010_length_164_cov_0.886957_g28601_i0 PRJNA330616 29010 164 0.886957 1.45460948 brine shrimp arlivirus 9 2900384 Viruses Viruses 99 9.19e-23   NR UNI74140.1 2900384 g28601 i0 87 0.98780487804878 54 7 98.8 0 162 1 330 383 UNI74140.1 MAG: hypothetical protein [brine shrimp arlivirus 9] diamond 162 99 1 Viruses   Orthornavirae Negarnaviricota Monjiviricetes Mononegavirales Lispiviridae Arlivirus brine shrimp arlivirus 9
30106114 30106114 PRJNA330616_P_NODE_32_length_3692_cov_4.356849_g21_i0 PRJNA330616 32 3692 4.356849 160.85486508 Red mite associated cystovirus 2936548 Viruses Viruses 224 1.16e-57   NR UQT02512.1 2936548 g21 i0 26.2 0.58261105092091 717 474 55.5 19 1514 3562 8 703 UQT02512.1 P1 [Red mite associated cystovirus] diamond 2151 224 1 Viruses   Orthornavirae Duplornaviricota Vidaverviricetes Mindivirales Cystoviridae Cystovirus Red mite associated cystovirus
31022544 31022544 PRJNA330616_P_NODE_26655_length_166_cov_0.871795_g26246_i0 PRJNA330616 26655 166 0.871795 1.4471797 Macrobrachium rosenbergii narna-like virus 1 3132536 Viruses Viruses 48.1 1.67e-4   NR WWZ85587.1 3132536 g26246 i0 43.6 0.993975903614458 55 31 99.4 0 166 2 280 334 WWZ85587.1 RNA-dependent RNA polymerase [Macrobrachium rosenbergii narna-like virus 1] diamond 165 48.1 1 Viruses   Orthornavirae Lenarviricota Amabiliviricetes Wolframvirales Narnaviridae   Macrobrachium rosenbergii narna-like virus 1
31465313 31465313 PRJNA330616_P_NODE_2776_length_530_cov_4.781705_g2372_i0 PRJNA330616 2776 530 4.781705 25.3430365 Yunnan sediment cysto-like virus 1 2824333 Viruses Viruses 96.3 5.1e-20   NR QYF49669.1 2824333 g2372 i0 35.9 0.866037735849057 153 92 86.6 3 501 43 205 351 QYF49669.1 MAG: putative RNA-dependent RNA polymerase, partial [Yunnan sediment cysto-like virus 1] diamond 459 96.3 1 Viruses   Orthornavirae Duplornaviricota Vidaverviricetes Mindivirales Cystoviridae   Yunnan sediment cysto-like virus 1
31718143 31718143 PRJNA330616_P_NODE_37_length_3164_cov_8.417657_g25_i0 PRJNA330616 37 3164 8.417657 266.33466748 Sichuan farmland cysto-like virus 2824592 Viruses Viruses 329 3.3e-96   NR QYF49781.1 2824592 g25 i0 36.3 0.441845764854614 466 276 43.6 5 1380 1 11 461 QYF49781.1 MAG: putative RNA-dependent RNA polymerase [Sichuan farmland cysto-like virus] diamond 1398 329 1 Viruses   Orthornavirae Duplornaviricota Vidaverviricetes Mindivirales Cystoviridae   Sichuan farmland cysto-like virus
31749608 31749608 PRJNA330616_P_NODE_27717_length_165_cov_0.879310_g27308_i0 PRJNA330616 27717 165 0.87931 1.4508615 Fish-associated picorna-like virus 3 3003959 Viruses Viruses 81.6 2.58e-16   NR XCM67837.1 3003959 g27308 i0 69.1 1 55 17 100 0 165 1 1019 1073 XCM67837.1 MAG: nonstructural polyprotein [Picornavirales sp.] diamond 165 81.6 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Picornavirales     Fish-associated picorna-like virus 3
31939412 31939412 PRJNA330616_P_NODE_15697_length_211_cov_1.259259_g15288_i0 PRJNA330616 15697 211 1.259259 2.65703649 Ripaglac virus 3130411 Viruses Viruses 67.4 4.79e-11   NR WZH59599.1 3130411 g15288 i0 65.8 0.540284360189573 38 13 54 0 96 209 9 46 WZH59599.1 MAG: RNA-dependent RNA polymerase [Ripaglac virus] diamond 114 67.4 1 Viruses   Orthornavirae Lenarviricota Howeltoviricetes Cryppavirales Mitoviridae   Ripaglac virus

Advanced export

JSON shape: default, array, newline-delimited

CSV options: 

CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;