RNAquarium Metadata Server
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contig_metadata

3 rows where bioproject = "PRJNA330616", tax_kingdom = "Fungi" and tax_phylum = "Microsporidia"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Microsporidia · 3 ✖

tax_kingdom 1

  • Fungi · 3 ✖

tax_clade 1

bioproject 1

  • PRJNA330616 · 3 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
2940454 2940454 PRJNA330616_P_NODE_31243_length_162_cov_0.902655_g30834_i0 PRJNA330616 31243 162 0.902655 1.4623011 Vairimorpha necatrix 6039 Fungi Fungi 289 9.44e-74   NTclustered gi|2735586241|ref|XR_010574013.1| 6039 g30834 i0 98.773 93.0123456790123 163 1 100 1 1 162 967 1129 Vairimorpha necatrix 5.8S-23S ribosomal RNA (VNE69_07802), rRNA blastn 15068 289 1 Eukaryota Opisthokonta Fungi Microsporidia     Nosematidae Vairimorpha Vairimorpha necatrix
13822815 13822815 PRJNA330616_P_NODE_26731_length_166_cov_0.871795_g26322_i0 PRJNA330616 26731 166 0.871795 1.4471797 Microsporidium 144516 Fungi Fungi 307 2.69e-79   NTclustered gi|333036713|gb|HM566197.1| 1032361 g26322 i0 100 100.16265060241 166 0 100 0 1 166 733 568 Microsporidium sp. Oise small subunit ribosomal RNA gene, partial sequence blastn 16627 307 1 Eukaryota Opisthokonta Fungi Microsporidia       Microsporidium Microsporidium sp. Oise
29885230 29885230 PRJNA330616_P_NODE_32391_length_161_cov_0.910714_g31982_i0 PRJNA330616 32391 161 0.910714 1.46624954 Mitosporidium daphniae 1485682 Fungi Fungi 89.7 3.38e-19   NR XP_013238550.1 1485682 g31982 i0 73.6 11.8509316770186 53 14 98.8 0 2 160 751 803 XP_013238550.1 uncharacterized protein DI09_20p90 [Mitosporidium daphniae] diamond 1908 89.7 1 Eukaryota Opisthokonta Fungi Microsporidia       Mitosporidium Mitosporidium daphniae

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;