RNAquarium Metadata Server
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contig_metadata

4 rows where bioproject = "PRJNA330616", tax_kingdom = "Fungi" and tax_phylum = "Blastocladiomycota"

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tax_superkingdom 1

tax_phylum 1

  • Blastocladiomycota · 4 ✖

tax_kingdom 1

  • Fungi · 4 ✖

tax_clade 1

bioproject 1

  • PRJNA330616 · 4 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
11868210 11868210 PRJNA330616_P_NODE_16310_length_207_cov_1.936709_g15901_i0 PRJNA330616 16310 207 1.936709 4.00898763 Fungi 4751 Fungi Fungi 84.7 3.68e-17   NR KAJ3369811.1 64504 g15901 i0 65.6 3.49275362318841 61 21 88.4 0 19 201 198 258 KAJ3369811.1 serine protease [Allomyces arbusculus] diamond 723 84.7 1 Eukaryota Opisthokonta Fungi Blastocladiomycota Blastocladiomycetes Blastocladiales Blastocladiaceae Allomyces Allomyces arbusculus
28039528 28039528 PRJNA330616_P_NODE_10785_length_252_cov_1.004926_g10376_i0 PRJNA330616 10785 252 1.004926 2.53241352 Blastocladiomycota 451459 Fungi Fungi 61.2 1.78e-9   NR KAI9179818.1 1313167 g10376 i0 74.4 3.88095238095238 39 10 46.4 0 3 119 109 147 KAI9179818.1 myosin II light chain [Blastocladiella emersonii ATCC 22665] diamond 978 61.6 0.993506493506494 Eukaryota Opisthokonta Fungi Blastocladiomycota Blastocladiomycetes Blastocladiales Blastocladiaceae Blastocladiella Blastocladiella emersonii
29379835 29379835 PRJNA330616_P_NODE_28029_length_165_cov_0.879310_g27620_i0 PRJNA330616 28029 165 0.87931 1.4508615 Blastocladiella britannica 64508 Fungi Fungi 64.3 3.1e-10   NR KAI9219467.1 64508 g27620 i0 55.6 0.981818181818182 54 24 98.2 0 3 164 270 323 KAI9219467.1 MCM2/3/5 family-domain-containing protein [Blastocladiella britannica] diamond 162 64.3 1 Eukaryota Opisthokonta Fungi Blastocladiomycota Blastocladiomycetes Blastocladiales Blastocladiaceae Blastocladiella Blastocladiella britannica
32161240 32161240 PRJNA330616_P_NODE_32458_length_161_cov_0.910714_g32049_i0 PRJNA330616 32458 161 0.910714 1.46624954 Blastocladiella emersonii ATCC 22665 1313167 Fungi Fungi 90.9 1.31e-19   NR KAI9184179.1 1313167 g32049 i0 76.9 14.5714285714286 52 12 96.9 0 3 158 167 218 KAI9184179.1 bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase [Blastocladiella emersonii ATCC 22665] diamond 2346 90.9 1 Eukaryota Opisthokonta Fungi Blastocladiomycota Blastocladiomycetes Blastocladiales Blastocladiaceae Blastocladiella Blastocladiella emersonii

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;