RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA330616" and tax_kingdom = "Bamfordvirae"

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tax_superkingdom 1

tax_kingdom 1

  • Bamfordvirae · 2 ✖

bioproject 1

  • PRJNA330616 · 2 ✖

analysis 1

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
28116767 28116767 PRJNA330616_P_NODE_12365_length_235_cov_1.645161_g11956_i0 PRJNA330616 12365 235 1.645161 3.86612835 Marseillevirus LCMAC1 2506602 Viruses Viruses 57.8 1.68e-7   NR QBK85748.1 2506602 g11956 i0 36.6 0.906382978723404 71 43 90.6 1 230 18 330 398 QBK85748.1 MAG: ribonucleoside diphosphate reductase, large subunit [Marseillevirus LCMAC101] diamond 213 57.8 1 Viruses   Bamfordvirae Nucleocytoviricota Megaviricetes Pimascovirales Marseilleviridae   Marseillevirus LCMAC101
31686354 31686354 PRJNA330616_P_NODE_32877_length_156_cov_4.682243_g32468_i0 PRJNA330616 32877 156 4.682243 7.30429908 Pimephales minnow adintovirus 2609864 Viruses Viruses 50.8 1.2e-5   NR DAC81394.1 2609864 g32468 i0 68.8 0.615384615384615 32 10 61.5 0 60 155 7 38 DAC81394.1 TPA_asm: FtsK [Pimephales minnow adintovirus] diamond 96 50.8 1 Viruses   Bamfordvirae Preplasmiviricota Polintoviricetes Orthopolintovirales Adintoviridae   Pimephales minnow adintovirus

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;