RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA330616", tax_clade = "Bacteria candidate phyla" and tax_phylum = "Minisyncoccota"

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tax_superkingdom 1

tax_phylum 1

  • Minisyncoccota · 2 ✖

tax_clade 1

  • Bacteria candidate phyla · 2 ✖

bioproject 1

  • PRJNA330616 · 2 ✖

analysis 1

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
28842918 28842918 PRJNA330616_P_NODE_19468_length_191_cov_1.429577_g19059_i0 PRJNA330616 19468 191 1.429577 2.73049207 Minisyncoccota bacterium 2053589 Bacteria Bacteria 45.1 0.00283   NR HVX91244.1 2053589 g19059 i0 52.3 0.691099476439791 44 21 69.1 0 134 3 322 365 HVX91244.1 T9SS type A sorting domain-containing protein [Candidatus Paceibacterota bacterium] diamond 132 45.1 1 Bacteria Bacteria candidate phyla   Minisyncoccota         Minisyncoccota bacterium
32761229 32761229 PRJNA330616_P_NODE_20640_length_186_cov_1.116788_g20231_i0 PRJNA330616 20640 186 1.116788 2.07722568 Minisyncoccota bacterium 2053589 Bacteria Bacteria 54.7 1.1e-6   NR MDR3547936.1 2053589 g20231 i0 71.9 0.516129032258065 32 9 51.6 0 96 1 513 544 MDR3547936.1 reverse transcriptase domain-containing protein [Candidatus Paceibacterota bacterium] diamond 96 54.7 1 Bacteria Bacteria candidate phyla   Minisyncoccota         Minisyncoccota bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;