RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA330616", tax_clade = "Bacteria candidate phyla" and tax_phylum = "Candidatus Saccharimonadota"

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tax_superkingdom 1

tax_phylum 1

  • Candidatus Saccharimonadota · 2 ✖

tax_clade 1

  • Bacteria candidate phyla · 2 ✖

bioproject 1

  • PRJNA330616 · 2 ✖

analysis 1

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
30137408 30137408 PRJNA330616_P_NODE_26892_length_166_cov_0.871795_g26483_i0 PRJNA330616 26892 166 0.871795 1.4471797 Candidatus Saccharimonadota bacterium 2026720 Bacteria Bacteria 42.4 0.0176   NR MCA9324640.1 2026720 g26483 i0 38.2 0.993975903614458 55 33 97.6 1 162 1 56 110 MCA9324640.1 hypothetical protein [Candidatus Saccharibacteria bacterium] diamond 165 42.4 1 Bacteria Bacteria candidate phyla   Candidatus Saccharimonadota         Candidatus Saccharimonadota bacterium
32635068 32635068 PRJNA330616_P_NODE_3900_length_435_cov_2.266839_g3493_i0 PRJNA330616 3900 435 2.266839 9.86074965 Candidatus Saccharimonadota bacterium 2026720 Bacteria Bacteria 59.3 4.14e-8   NR MDO8336508.1 2026720 g3493 i0 33 0.710344827586207 103 61 67.6 4 98 391 26 125 MDO8336508.1 hypothetical protein [Candidatus Saccharibacteria bacterium] diamond 309 59.3 1 Bacteria Bacteria candidate phyla   Candidatus Saccharimonadota         Candidatus Saccharimonadota bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;