RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA326068" and tax_phylum = "Echinodermata"

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tax_superkingdom 1

tax_phylum 1

  • Echinodermata · 2 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA326068 · 2 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
27390838 27390838 PRJNA326068_P_NODE_12903_length_253_cov_2.406250_g11940_i0 PRJNA326068 12903 253 2.40625 6.0878125 Holothuria leucospilota 206669 Echinodermata other_Eukaryota 46.2 4.75e-4   NR KAJ8043773.1 206669 g11940 i0 52.3 1.07905138339921 44 21 52.2 0 5 136 56 99 KAJ8043773.1 hypothetical protein HOLleu_11030 [Holothuria leucospilota] diamond 273 46.2 1 Eukaryota Opisthokonta Metazoa Echinodermata Holothuroidea Aspidochirotida Holothuriidae Holothuria Holothuria leucospilota
32824255 32824255 PRJNA326068_P_NODE_19620_length_156_cov_1.299213_g18657_i0 PRJNA326068 19620 156 1.299213 2.02677228 Holothuria leucospilota 206669 Echinodermata other_Eukaryota 44.7 0.00237   NR KAJ8031644.1 206669 g18657 i0 51 1.80769230769231 49 15 90.4 2 12 152 2109 2150 KAJ8031644.1 IgGFc-binding protein [Holothuria leucospilota] diamond 282 44.7 1 Eukaryota Opisthokonta Metazoa Echinodermata Holothuroidea Aspidochirotida Holothuriidae Holothuria Holothuria leucospilota

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;