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contig_metadata

18 rows where bioproject = "PRJNA326068" and tax_phylum = "Ciliophora"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Ciliophora · 18 ✖

tax_clade 1

bioproject 1

  • PRJNA326068 · 18 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
1069219 1069219 PRJNA326068_P_NODE_7521_length_387_cov_2.142458_g6581_i0 PRJNA326068 7521 387 2.142458 8.29131246 Chilodonella 151076 SAR_Eukaryotes SAR_Eukaryotes 281 4.33e-71   NTclustered gi|1389430804|gb|MH341632.1| 1654720 g6581 i0 97.561 48.3772609819121 164 4 42 0 224 387 3082 2919 Chilodonella piscicola strain SC large subunit ribosomal RNA gene, partial sequence blastn 18722 281 1 Eukaryota Sar   Ciliophora Phyllopharyngea Chlamydodontida Chilodonellidae Chilodonella Chilodonella piscicola
1664142 1664142 PRJNA326068_P_NODE_18842_length_167_cov_1.673913_g17879_i0 PRJNA326068 18842 167 1.673913 2.79543471 Tetrahymena thermophila 5911 SAR_Eukaryotes SAR_Eukaryotes 248 1.66e-61   NTclustered gi|146181944|ref|XM_001023662.2| 312017 g17879 i0 93.413 1 167 11 100 0 1 167 346 180 Tetrahymena thermophila SB210 60S ribosomal protein L13/L16 partial mRNA blastn 167 248 1 Eukaryota Sar   Ciliophora Oligohymenophorea Hymenostomatida Tetrahymenidae Tetrahymena Tetrahymena thermophila
6767065 6767065 PRJNA326068_P_NODE_9726_length_324_cov_2.444068_g8767_i0 PRJNA326068 9726 324 2.444068 7.91878032 Chilodonella uncinata 151077 SAR_Eukaryotes SAR_Eukaryotes 233 1.01e-56   NTclustered gi|110645063|gb|DQ665311.1| 151077 g8767 i0 95.833 31.1203703703704 144 6 63 0 181 324 1141 998 Chilodonella uncinata clone 1 elongation factor 1-alpha (EF-1alpha) gene, partial cds; macronuclear blastn 10083 233 1 Eukaryota Sar   Ciliophora Phyllopharyngea Chlamydodontida Chilodonellidae Chilodonella Chilodonella uncinata
10593131 10593131 PRJNA326068_P_NODE_19489_length_158_cov_1.573643_g18526_i0 PRJNA326068 19489 158 1.573643 2.48635594 Tetrahymena thermophila 5911 SAR_Eukaryotes SAR_Eukaryotes 86.1 1.29e-12   NTclustered gi|829188944|ref|XM_001031587.2| 312017 g18526 i0 81.731 0.658227848101266 104 17 65 2 1 103 178 76 Tetrahymena thermophila SB210 60S ribosomal L7Ae-like protein partial mRNA blastn 104 86.1 1 Eukaryota Sar   Ciliophora Oligohymenophorea Hymenostomatida Tetrahymenidae Tetrahymena Tetrahymena thermophila
13822634 13822634 PRJNA326068_P_NODE_19031_length_164_cov_2.214815_g18068_i0 PRJNA326068 19031 164 2.214815 3.6322966 Chilodonella 151076 SAR_Eukaryotes SAR_Eukaryotes 303 3.42e-78   NTclustered gi|158147318|gb|EU047813.1| 151077 g18068 i0 100 75.4573170731707 164 0 100 0 1 164 75 238 Chilodonella uncinata strain ATCC 50194 5.8S ribosomal RNA gene and internal transcribed spacer 2, partial sequence; macronuclear blastn 12375 303 1 Eukaryota Sar   Ciliophora Phyllopharyngea Chlamydodontida Chilodonellidae Chilodonella Chilodonella uncinata
14418269 14418269 PRJNA326068_P_NODE_17692_length_186_cov_2.624204_g16729_i0 PRJNA326068 17692 186 2.624204 4.88101944 Philasterida sp. 2006707 SAR_Eukaryotes SAR_Eukaryotes 93.5 9.37e-15   NTclustered gi|2354193480|gb|OP896969.1| 2006707 g16729 i0 87.5 40.8172043010753 80 10 43 0 107 186 1136 1215 Philasterida sp. strain tDaCF9_52 large subunit ribosomal RNA gene, partial sequence blastn 7592 93.5 1 Eukaryota Sar   Ciliophora Oligohymenophorea Philasterida     Philasterida sp.
15692119 15692119 PRJNA326068_P_NODE_4693_length_510_cov_6.334719_g3897_i0 PRJNA326068 4693 510 6.334719 32.3070669 Chilodonella piscicola 1654720 SAR_Eukaryotes SAR_Eukaryotes 518 4.09e-142   NTclustered gi|1389430804|gb|MH341632.1| 1654720 g3897 i0 94.118 27.2823529411765 340 20 67 0 170 509 312 651 Chilodonella piscicola strain SC large subunit ribosomal RNA gene, partial sequence blastn 13914 518 1 Eukaryota Sar   Ciliophora Phyllopharyngea Chlamydodontida Chilodonellidae Chilodonella Chilodonella piscicola
15692140 15692140 PRJNA326068_P_NODE_9473_length_330_cov_47.262458_g8516_i0 PRJNA326068 9473 330 47.262458 155.9661114 Chilodonella piscicola 1654720 SAR_Eukaryotes SAR_Eukaryotes 425 1.59e-114   NTclustered gi|1389430804|gb|MH341632.1| 1654720 g8516 i0 91.374 84.2090909090909 313 24 95 3 1 313 97 406 Chilodonella piscicola strain SC large subunit ribosomal RNA gene, partial sequence blastn 27789 425 1 Eukaryota Sar   Ciliophora Phyllopharyngea Chlamydodontida Chilodonellidae Chilodonella Chilodonella piscicola
16966799 16966799 PRJNA326068_P_NODE_4854_length_501_cov_2.542373_g4046_i0 PRJNA326068 4854 501 2.542373 12.73728873 Chilodonella piscicola 1654720 SAR_Eukaryotes SAR_Eukaryotes 859 0   NTclustered gi|1389430804|gb|MH341632.1| 1654720 g4046 i0 97.605 86.0499001996008 501 12 100 0 1 501 2024 2524 Chilodonella piscicola strain SC large subunit ribosomal RNA gene, partial sequence blastn 43111 859 1 Eukaryota Sar   Ciliophora Phyllopharyngea Chlamydodontida Chilodonellidae Chilodonella Chilodonella piscicola
19515269 19515269 PRJNA326068_P_NODE_10076_length_315_cov_1.723776_g9117_i0 PRJNA326068 10076 315 1.723776 5.4298944 Vorticella sp. 4 JG-2011 1295638 SAR_Eukaryotes SAR_Eukaryotes 523 5.199999999999998e-144   NTclustered gi|512134943|gb|JX178902.1| 1295638 g9117 i0 95.873 98.584126984127 315 11 100 1 1 315 1035 1347 Vorticella sp. 4 JG-2011 clone 2 18S ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and 28S ribosomal RNA gene, partial sequence blastn 31054 523 1 Eukaryota Sar   Ciliophora Oligohymenophorea Sessilida Vorticellidae Vorticella Vorticella sp. 4 JG-2011
21470913 21470913 PRJNA326068_P_NODE_20037_length_151_cov_1.704918_g19074_i0 PRJNA326068 20037 151 1.704918 2.57442618 Chilodonella 151076 SAR_Eukaryotes SAR_Eukaryotes 274 2.42e-69   NTclustered gi|13194559|gb|AF300281.1|AF300281 151077 g19074 i0 99.338 99.1192052980132 151 1 100 0 1 151 1542 1392 Chilodonella uncinata clone 1 18S small subunit ribosomal RNA gene, partial sequence blastn 14967 274 1 Eukaryota Sar   Ciliophora Phyllopharyngea Chlamydodontida Chilodonellidae Chilodonella Chilodonella uncinata
28401022 28401022 PRJNA326068_P_NODE_12206_length_267_cov_1.819328_g11243_i0 PRJNA326068 12206 267 1.819328 4.85760576 Stylonychia lemnae 5949 SAR_Eukaryotes SAR_Eukaryotes 59.7 5.4e-9   NR CDW74504.1 5949 g11243 i0 64.1 0.876404494382023 39 14 43.8 0 119 3 70 108 CDW74504.1 histone h2b [Stylonychia lemnae] diamond 234 59.7 1 Eukaryota Sar   Ciliophora Spirotrichea Sporadotrichida Oxytrichidae Stylonychia Stylonychia lemnae
28559078 28559078 PRJNA326068_P_NODE_6047_length_446_cov_2.007194_g5168_i0 PRJNA326068 6047 446 2.007194 8.95208524 Pseudocohnilembus persalinus 266149 SAR_Eukaryotes SAR_Eukaryotes 115 1.01e-29   NR KRX01081.1 266149 g5168 i0 45.8 1.76233183856502 142 74 95.5 1 441 16 1 139 KRX01081.1 hypothetical protein PPERSA_02177 [Pseudocohnilembus persalinus] diamond 786 115 1 Eukaryota Sar   Ciliophora Oligohymenophorea Philasterida Pseudocohnilembidae Pseudocohnilembus Pseudocohnilembus persalinus
29790117 29790117 PRJNA326068_P_NODE_6731_length_417_cov_1.773196_g5812_i0 PRJNA326068 6731 417 1.773196 7.39422732 Moneuplotes crassus 5936 SAR_Eukaryotes SAR_Eukaryotes 104 2.21e-25   NR CAI2382183.1 5936 g5812 i0 71.8 1 71 20 51.1 0 214 2 57 127 CAI2382183.1 unnamed protein product [Moneuplotes crassus] diamond 417 104 1 Eukaryota Sar   Ciliophora Spirotrichea Euplotida Euplotidae Moneuplotes Moneuplotes crassus
30264483 30264483 PRJNA326068_P_NODE_14572_length_225_cov_2.714286_g13609_i0 PRJNA326068 14572 225 2.714286 6.1071435 Paramecium octaurelia 43137 SAR_Eukaryotes SAR_Eukaryotes 68.9 1.11e-12   NR CAD8206115.1 43137 g13609 i0 54.1 1.97333333333333 74 33 97.3 1 219 1 1 74 CAD8206115.1 unnamed protein product [Paramecium octaurelia] diamond 444 68.9 1 Eukaryota Sar   Ciliophora Oligohymenophorea Peniculida Parameciidae Paramecium Paramecium octaurelia
31703771 31703771 PRJNA326068_P_NODE_10577_length_303_cov_1.835766_g9616_i0 PRJNA326068 10577 303 1.835766 5.56237098 Spirotrichea 33829 SAR_Eukaryotes SAR_Eukaryotes 144 6.369999999999998e-42   NR CAI2382183.1 5936 g9616 i0 73 50.4950495049505 100 26 99 1 301 2 45 143 CAI2382183.1 unnamed protein product [Moneuplotes crassus] diamond 15300 144 1 Eukaryota Sar   Ciliophora Spirotrichea Euplotida Euplotidae Moneuplotes Moneuplotes crassus
32477617 32477617 PRJNA326068_P_NODE_16939_length_199_cov_1.723529_g15976_i0 PRJNA326068 16939 199 1.723529 3.42982271 Pseudocohnilembus persalinus 266149 SAR_Eukaryotes SAR_Eukaryotes 47 2.81e-4   NR KRW99836.1 266149 g15976 i0 43.6 0.829145728643216 55 30 81.4 1 196 35 56 110 KRW99836.1 hypothetical protein PPERSA_10955 [Pseudocohnilembus persalinus] diamond 165 47 1 Eukaryota Sar   Ciliophora Oligohymenophorea Philasterida Pseudocohnilembidae Pseudocohnilembus Pseudocohnilembus persalinus
32683902 32683902 PRJNA326068_P_NODE_14640_length_224_cov_4.030769_g13677_i0 PRJNA326068 14640 224 4.030769 9.02892256 Spirotrichea 33829 SAR_Eukaryotes SAR_Eukaryotes 109 4.41e-29   NR O97484.1 5936 g13677 i0 63.5 14.8660714285714 74 27 99.1 0 224 3 20 93 O97484.1 RecName: Full=Histone H2B [Moneuplotes crassus] diamond 3330 109 1 Eukaryota Sar   Ciliophora Spirotrichea Euplotida Euplotidae Moneuplotes Moneuplotes crassus

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;