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contig_metadata

7 rows where bioproject = "PRJNA326068" and tax_phylum = "Chytridiomycota"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Chytridiomycota · 7 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA326068 · 7 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
4897051 4897051 PRJNA326068_P_NODE_18304_length_175_cov_24.212329_g17341_i0 PRJNA326068 18304 175 24.212329 42.37157575 Piromyces 4821 Fungi Fungi 171 3.9e-38   NTclustered gi|1811122634|gb|MT085689.1| 45796 g17341 i0 84.571 100.154285714286 175 24 99 3 2 175 816 644 Piromyces sp. isolate DB3_Clone_B4 internal transcribed spacer 1, partial sequence; 5.8S ribosomal RNA gene and internal transcribed spacer 2, complete sequence; and large subunit ribosomal RNA gene, partial sequence blastn 17527 171 1 Eukaryota Opisthokonta Fungi Chytridiomycota Neocallimastigomycetes Neocallimastigales Neocallimastigaceae Piromyces Piromyces sp.
7447076 7447076 PRJNA326068_P_NODE_19266_length_160_cov_8.465649_g18303_i0 PRJNA326068 19266 160 8.465649 13.5450384 Rhizophlyctis 64515 Fungi Fungi 296 5.55e-76   NTclustered gi|1019982900|gb|KR349615.1| 64517 g18303 i0 100 100.00625 160 0 100 0 1 160 636 795 Rhizophlyctis rosea isolate WJD197 28S ribosomal RNA gene, partial sequence blastn 16001 296 1 Eukaryota Opisthokonta Fungi Chytridiomycota Chytridiomycetes Rhizophlyctidales Rhizophlyctidaceae Rhizophlyctis Rhizophlyctis rosea
11272388 11272388 PRJNA326068_P_NODE_4329_length_531_cov_12.772908_g3554_i0 PRJNA326068 4329 531 12.772908 67.82414148 Nowakowskiella 109880 Fungi Fungi 189 3.809999999999999e-43   NTclustered gi|194241380|gb|EU828507.1| 546781 g3554 i0 97.321 26.1939736346516 112 2 31 1 1 112 198 308 Nowakowskiella sp. JH FR 28S large subunit ribosomal RNA gene, partial sequence blastn 13909 189 1 Eukaryota Opisthokonta Fungi Chytridiomycota Chytridiomycetes Cladochytriales Nowakowskiellaceae Nowakowskiella Nowakowskiella sp. JH FR
20790958 20790958 PRJNA326068_P_NODE_8457_length_357_cov_11.963415_g7508_i0 PRJNA326068 8457 357 11.963415 42.70939155 Spizellomyces punctatus 109760 Fungi Fungi 355 2.3e-93   NTclustered gi|1027029543|ref|XR_001677161.1| 645134 g7508 i0 94.397 59.4733893557423 232 12 65 1 127 357 4084 3853 Spizellomyces punctatus DAOM BR117 28S ribosomal RNA (SPPG_11002), rRNA blastn 21232 355 1 Eukaryota Opisthokonta Fungi Chytridiomycota Chytridiomycetes Spizellomycetales Spizellomycetaceae Spizellomyces Spizellomyces punctatus
24615559 24615559 PRJNA326068_P_NODE_8860_length_346_cov_4.529968_g7906_i0 PRJNA326068 8860 346 4.529968 15.67368928 Rhizophlyctis rosea 64517 Fungi Fungi 632 9.199999999999996e-177   NTclustered gi|166178820|gb|EU379190.1| 64517 g7906 i0 99.71 98.7456647398844 345 1 99 0 1 345 278 622 Rhizophlyctis rosea isolate KP036 28S ribosomal RNA gene, partial sequence blastn 34166 632 1 Eukaryota Opisthokonta Fungi Chytridiomycota Chytridiomycetes Rhizophlyctidales Rhizophlyctidaceae Rhizophlyctis Rhizophlyctis rosea
28242983 28242983 PRJNA326068_P_NODE_9506_length_330_cov_2.458472_g8549_i0 PRJNA326068 9506 330 2.458472 8.1129576 Lobulomyces angularis 109889 Fungi Fungi 117 3.3499999999999996e-31   NR KAJ3383484.1 109889 g8549 i0 72.7 1.46363636363636 77 21 70 0 98 328 42 118 KAJ3383484.1 profilin, required for normal timing of actin polymerization in response to thermal stress [Lobulomyces angularis] diamond 483 117 1 Eukaryota Opisthokonta Fungi Chytridiomycota Chytridiomycetes Lobulomycetales Lobulomycetaceae Lobulomyces Lobulomyces angularis
28716869 28716869 PRJNA326068_P_NODE_13307_length_246_cov_2.092166_g12344_i0 PRJNA326068 13307 246 2.092166 5.14672836 Hyaloraphidium curvatum 82268 Fungi Fungi 137 3.89e-39   NR KAI9026826.1 82268 g12344 i0 83.5 1.96341463414634 79 12 96.3 1 1 237 54 131 KAI9026826.1 eukaryotic translation initiation factor 5A [Hyaloraphidium curvatum] diamond 483 137 1 Eukaryota Opisthokonta Fungi Chytridiomycota Monoblepharidomycetes Monoblepharidales   Hyaloraphidium Hyaloraphidium curvatum

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;