RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA326068", tax_kingdom = "Metazoa" and tax_phylum = "Cnidaria"

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tax_superkingdom 1

tax_phylum 1

  • Cnidaria · 2 ✖

tax_kingdom 1

  • Metazoa · 2 ✖

tax_clade 1

bioproject 1

  • PRJNA326068 · 2 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
4216702 4216702 PRJNA326068_P_NODE_12684_length_257_cov_6.495614_g11721_i0 PRJNA326068 12684 257 6.495614 16.69372798 Clytia hemisphaerica 252671 Cnidaria other_Eukaryota 230 1.0099999999999995e-55   NTclustered gi|2782899958|ref|XM_067068260.1| 252671 g11721 i0 85.333 149.07392996109 225 30 87 3 24 246 1206 983 PREDICTED: Clytia hemisphaerica uncharacterized protein (LOC136811635), mRNA blastn 38312 230 1 Eukaryota Opisthokonta Metazoa Cnidaria Hydrozoa Leptothecata Clytiidae Clytia Clytia hemisphaerica
19515295 19515295 PRJNA326068_P_NODE_15556_length_214_cov_1.697297_g14593_i0 PRJNA326068 15556 214 1.697297 3.63221558 Laomedea flexuosa 314520 Cnidaria other_Eukaryota 135 1.82e-27   NTclustered gi|62825461|gb|AY789867.1| 314520 g14593 i0 83.448 13.2102803738318 145 22 67 2 8 151 350 207 Laomedea flexuosa voucher 864IC calmodulin gene, partial cds blastn 2827 135 1 Eukaryota Opisthokonta Metazoa Cnidaria Hydrozoa Leptothecata Obeliidae Laomedea Laomedea flexuosa

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;