RNAquarium Metadata Server
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contig_metadata

4 rows where bioproject = "PRJNA326068", tax_kingdom = "Bacillati" and tax_phylum = "Cyanobacteriota"

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tax_superkingdom 1

tax_phylum 1

  • Cyanobacteriota · 4 ✖

tax_kingdom 1

  • Bacillati · 4 ✖

bioproject 1

  • PRJNA326068 · 4 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
9317460 9317460 PRJNA326068_P_NODE_20108_length_150_cov_2.413223_g19145_i0 PRJNA326068 20108 150 2.413223 3.6198345 Richelia sinica 1357545 Bacteria Bacteria 219 1.1399999999999997e-52   NTclustered gi|2059364121|gb|CP021056.1| 1357546 g19145 i0 93.333 242.413333333333 150 7 100 3 1 150 2717869 2718015 Richelia sinica FACHB-800 strain FACHB 800 chromosome, complete genome blastn 36362 219 1 Bacteria Cyanobacteriota/Melainabacteria group Bacillati Cyanobacteriota Cyanophyceae Nostocales Nostocaceae Richelia Richelia sinica
11868002 11868002 PRJNA326068_P_NODE_10010_length_317_cov_2.593750_g9051_i0 PRJNA326068 10010 317 2.59375 8.2221875 Leptolyngbya sp. 7M 2812896 Bacteria Bacteria 89.8 2.26e-13   NTclustered gi|2028908486|gb|CP070897.1| 2812896 g9051 i0 81.034 0.365930599369085 116 18 36 4 83 197 2366819 2366931 Leptolyngbya sp. 7M chromosome blastn 116 89.8 1 Bacteria Cyanobacteriota/Melainabacteria group Bacillati Cyanobacteriota Cyanophyceae Leptolyngbyales Leptolyngbyaceae Leptolyngbya Leptolyngbya sp. 7M
18241071 18241071 PRJNA326068_P_NODE_4375_length_528_cov_5.703407_g3599_i0 PRJNA326068 4375 528 5.703407 30.11398896 Prochlorothrix hollandica 1223 Bacteria Bacteria 457 9.4e-124   NTclustered gi|146740638|emb|AM709625.1| 317619 g3599 i0 82.772 172.448863636364 534 71 100 19 1 528 3278 2760 Prochlorothrix hollandica SAG 10.89 partial ribosomal RNA operon, strain SAG 10.89 blastn 91053 457 1 Bacteria Cyanobacteriota/Melainabacteria group Bacillati Cyanobacteriota Cyanophyceae Prochlorotrichales Prochlorotrichaceae Prochlorothrix Prochlorothrix hollandica
23341368 23341368 PRJNA326068_P_NODE_8039_length_370_cov_36.325513_g7092_i0 PRJNA326068 8039 370 36.325513 134.4043981 Leptolyngbya sp. 7M 2812896 Bacteria Bacteria 383 1.1e-101   NTclustered gi|2028908486|gb|CP070897.1| 2812896 g7092 i0 85.445 127.232432432432 371 51 99 3 1 369 2150425 2150794 Leptolyngbya sp. 7M chromosome blastn 47076 383 1 Bacteria Cyanobacteriota/Melainabacteria group Bacillati Cyanobacteriota Cyanophyceae Leptolyngbyales Leptolyngbyaceae Leptolyngbya Leptolyngbya sp. 7M

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;