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contig_metadata

6 rows where bioproject = "PRJNA326068", tax_kingdom = "Bacillati" and tax_phylum = "Chloroflexota"

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tax_superkingdom 1

tax_phylum 1

  • Chloroflexota · 6 ✖

tax_kingdom 1

  • Bacillati · 6 ✖

bioproject 1

  • PRJNA326068 · 6 ✖

analysis 1

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
4216719 4216719 PRJNA326068_P_NODE_17764_length_185_cov_1.948718_g16801_i0 PRJNA326068 17764 185 1.948718 3.6051283 uncultured Chloroflexia bacterium 1672391 Bacteria Bacteria 224 3.16e-54   NTclustered gi|2874254102|emb|OY970185.1| 1672391 g16801 i0 90.116 81.427027027027 172 17 93 0 14 185 1860471 1860300 MAG: uncultured Chloroflexia bacterium isolate MFD06435.bin.c.3 genome assembly, chromosome: 1 blastn 15064 224 1 Bacteria   Bacillati Chloroflexota Chloroflexia       uncultured Chloroflexia bacterium
11272391 11272391 PRJNA326068_P_NODE_7649_length_382_cov_5.824363_g6707_i0 PRJNA326068 7649 382 5.824363 22.24906666 Herpetosiphon 64 Bacteria Bacteria 235 3.37e-57   NTclustered gi|470482680|ref|NR_076546.1| 65 g6707 i0 78.372 111.026178010471 393 63 99 18 3 382 2459 2076 Herpetosiphon aurantiacus strain DSM 785 23S ribosomal RNA gene, complete sequence blastn 42412 235 1 Bacteria   Bacillati Chloroflexota Chloroflexia Herpetosiphonales Herpetosiphonaceae Herpetosiphon Herpetosiphon aurantiacus
13142966 13142966 PRJNA326068_P_NODE_13591_length_240_cov_37.104265_g12628_i0 PRJNA326068 13591 240 37.104265 89.050236 uncultured Chloroflexia bacterium 1672391 Bacteria Bacteria 130 9.69e-26   NTclustered gi|2874253788|emb|OY969772.1| 1672391 g12628 i0 78.027 49.7583333333333 223 37 91 11 20 237 672380 672595 MAG: uncultured Chloroflexia bacterium isolate MFD02416.bin.2.42 genome assembly, chromosome: 1 blastn 11942 130 1 Bacteria   Bacillati Chloroflexota Chloroflexia       uncultured Chloroflexia bacterium
14418272 14418272 PRJNA326068_P_NODE_18352_length_175_cov_1.684932_g17389_i0 PRJNA326068 18352 175 1.684932 2.948631 uncultured Chloroflexia bacterium 1672391 Bacteria Bacteria 100 5.19e-17   NTclustered gi|2874254132|emb|OY970217.1| 1672391 g17389 i0 77.528 13.2457142857143 178 32 100 7 1 175 3521702 3521874 MAG: uncultured Chloroflexia bacterium isolate MFD05684.bin.1.130 genome assembly, chromosome: 1 blastn 2318 100 1 Bacteria   Bacillati Chloroflexota Chloroflexia       uncultured Chloroflexia bacterium
16371779 16371779 PRJNA326068_P_NODE_8193_length_366_cov_2.878338_g7245_i0 PRJNA326068 8193 366 2.878338 10.53471708 Bacillati 1783272 Bacteria Bacteria 171 9.19e-38   NTclustered gi|2874253766|emb|OY969711.1| 1672391 g7245 i0 80.889 43.8715846994535 225 36 60 7 44 264 240192 240413 MAG: uncultured Chloroflexia bacterium isolate MFD09730.bin.c.1 genome assembly, chromosome: 1 blastn 16057 172 0.994186046511628 Bacteria   Bacillati Chloroflexota Chloroflexia       uncultured Chloroflexia bacterium
16966776 16966776 PRJNA326068_P_NODE_16834_length_200_cov_4.081871_g15871_i0 PRJNA326068 16834 200 4.081871 8.163742 Dehalococcoidia bacterium 2026734 Bacteria Bacteria 82.4 2.22e-11   NTclustered gi|2626233621|emb|OY820591.1| 2026734 g15871 i0 97.917 56.06 48 0 24 1 1 48 2075466 2075512 MAG: Dehalococcoidia bacterium isolate bad7acc4-ca48-4abb-846f-85865ba1c961 genome assembly, chromosome: 1 blastn 11212 82.4 1 Bacteria   Bacillati Chloroflexota Dehalococcoidia       Dehalococcoidia bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;