RNAquarium Metadata Server
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contig_metadata

6 rows where bioproject = "PRJNA326068", tax_clade = "Opisthokonta" and tax_phylum = "Annelida"

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tax_superkingdom 1

tax_phylum 1

  • Annelida · 6 ✖

tax_kingdom 1

tax_clade 1

  • Opisthokonta · 6 ✖

bioproject 1

  • PRJNA326068 · 6 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
389452 389452 PRJNA326068_P_NODE_3721_length_575_cov_2.111722_g2999_i0 PRJNA326068 3721 575 2.111722 12.1424015 Pettibonella multiuncinata 273003 Annelida Annelida 147 2.53e-30   NTclustered gi|46812186|gb|AY532359.1| 273003 g2999 i0 75.358 18.2591304347826 349 63 60 12 232 575 873 1203 Pettibonella multiuncinata 18S ribosomal RNA gene, partial sequence blastn 10499 147 1 Eukaryota Opisthokonta Metazoa Annelida Polychaeta   Orbiniidae Pettibonella Pettibonella multiuncinata
2940043 2940043 PRJNA326068_P_NODE_14443_length_227_cov_2.015152_g13480_i0 PRJNA326068 14443 227 2.015152 4.57439504 Eiseniella tetraedra 1302610 Annelida Annelida 165 2.49e-36   NTclustered gi|674655954|gb|KJ911979.1| 1302610 g13480 i0 100 66.5198237885463 89 0 67 0 3 91 140 228 Eiseniella tetraedra isolate MPL347 18S ribosomal RNA gene, partial sequence blastn 15100 165 1 Eukaryota Opisthokonta Metazoa Annelida Clitellata Crassiclitellata Lumbricidae Eiseniella Eiseniella tetraedra
4897044 4897044 PRJNA326068_P_NODE_13004_length_251_cov_2.639640_g12041_i0 PRJNA326068 13004 251 2.63964 6.6254964 Lumbricidae 6392 Annelida Annelida 464 2.47e-126   NTclustered gi|62084453|gb|AY874485.1| 6396 g12041 i0 100 131.733067729084 251 0 100 0 1 251 1741 1991 Eisenia fetida voucher MPLe0033 28S large subunit ribosomal RNA gene, partial sequence blastn 33065 464 1 Eukaryota Opisthokonta Metazoa Annelida Clitellata Crassiclitellata Lumbricidae Eisenia Eisenia fetida
13142970 13142970 PRJNA326068_P_NODE_14791_length_222_cov_12.046632_g13828_i0 PRJNA326068 14791 222 12.046632 26.74352304 Dendrobaena platyura 1729206 Annelida Annelida 388 1.32e-103   NTclustered gi|2702707874|gb|PP528191.1| 1729206 g13828 i0 98.198 125.531531531532 222 4 100 0 1 222 11 232 Dendrobaena platyura isolate E14 large subunit ribosomal RNA gene, partial sequence blastn 27868 388 1 Eukaryota Opisthokonta Metazoa Annelida Clitellata Crassiclitellata Lumbricidae Dendrobaena Dendrobaena platyura
13822638 13822638 PRJNA326068_P_NODE_20111_length_150_cov_2.347107_g19148_i0 PRJNA326068 20111 150 2.347107 3.5206605 Metazoa 33208 Annelida Annelida 278 1.85e-70   NTclustered gi|255039734|gb|GQ337499.1| 6398 g19148 i0 100 131 150 0 100 0 1 150 80 229 Lumbricus terrestris 18S ribosomal RNA gene, partial sequence blastn 19650 278 1 Eukaryota Opisthokonta Metazoa Annelida Clitellata Crassiclitellata Lumbricidae Lumbricus Lumbricus terrestris
20790888 20790888 PRJNA326068_P_NODE_11917_length_273_cov_1.848361_g10954_i0 PRJNA326068 11917 273 1.848361 5.04602553 Ailoscolex lacteospumosus 1046305 Annelida Annelida 470 5.839999999999999e-128   NTclustered gi|2920003323|emb|OZ238861.1| 1046305 g10954 i0 97.794 122.417582417582 272 6 99 0 1 272 23326049 23326320 Ailoscolex lacteospumosus genome assembly, chromosome: 2 blastn 33420 470 1 Eukaryota Opisthokonta Metazoa Annelida Clitellata Crassiclitellata Ailoscolecidae Ailoscolex Ailoscolex lacteospumosus

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;