RNAquarium Metadata Server
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contig_metadata

7 rows where bioproject = "PRJNA326068", tax_clade = "Discoba" and tax_phylum = "Euglenozoa"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Euglenozoa · 7 ✖

tax_clade 1

  • Discoba · 7 ✖

bioproject 1

  • PRJNA326068 · 7 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
6172097 6172097 PRJNA326068_P_NODE_6905_length_409_cov_8.655263_g5980_i0 PRJNA326068 6905 409 8.655263 35.40002567 Trypanosoma 5690 Euglenozoa other_Eukaryota 244 6.04e-60   NTclustered gi|2421780538|ref|XR_008255583.1| 5693 g5980 i0 92.857 48.0293398533007 168 12 41 0 50 217 11 178 Trypanosoma cruzi ribosomal RNA large subunit delta (M2), 5' partial (Tc00.1047053509005.101), partial rRNA blastn 19644 244 1 Eukaryota Discoba   Euglenozoa Kinetoplastea Trypanosomatida Trypanosomatidae Trypanosoma Trypanosoma cruzi
11272390 11272390 PRJNA326068_P_NODE_509_length_1330_cov_59.550346_g343_i0 PRJNA326068 509 1330 59.550346 792.0196018 Leishmania 5658 Euglenozoa other_Eukaryota 1245 0   NTclustered gi|440222377|gb|JX030045.1| 5659 g343 i0 84.047 130.17969924812 1354 152 100 47 1 1330 1320 7 Leishmania amazonensis isolate LaPH8.rRNA.15 28S ribosomal RNA (LSU-alpha), partial sequence blastn 173139 1251 0.995203836930456 Eukaryota Discoba   Euglenozoa Kinetoplastea Trypanosomatida Trypanosomatidae Leishmania Leishmania amazonensis
17646786 17646786 PRJNA326068_P_NODE_4294_length_533_cov_35.192460_g3524_i0 PRJNA326068 4294 533 35.19246 187.5758118 Rhynchomonas 127149 Euglenozoa other_Eukaryota 784 0   NTclustered gi|41400288|gb|AY425024.1| 127150 g3524 i0 96.617 84.5121951219512 473 15 89 1 1 473 473 2 Rhynchomonas nasuta strain DB8 18S ribosomal RNA gene, partial sequence blastn 45045 787 0.996188055908513 Eukaryota Discoba   Euglenozoa Kinetoplastea Neobodonida Rhynchomonadidae Rhynchomonas Rhynchomonas nasuta
18241039 18241039 PRJNA326068_P_NODE_115_length_2220_cov_45.837517_g68_i0 PRJNA326068 115 2220 45.837517 1017.5928774 Rhynchomonas nasuta 127150 Euglenozoa other_Eukaryota 2990 0   NTclustered gi|62871455|gb|AY998642.1| 127150 g68 i0 98.638 75.3103603603604 1689 22 76 1 448 2135 369 2057 Rhynchomonas nasuta strain SCCAP RH3 18S ribosomal RNA gene, partial sequence blastn 167189 2990 1 Eukaryota Discoba   Euglenozoa Kinetoplastea Neobodonida Rhynchomonadidae Rhynchomonas Rhynchomonas nasuta
19515286 19515286 PRJNA326068_P_NODE_13036_length_250_cov_16.339367_g12073_i0 PRJNA326068 13036 250 16.339367 40.8484175 Trypanosoma theileri 67003 Euglenozoa other_Eukaryota 283 7.379999999999999e-72   NTclustered gi|2026667530|dbj|LC618030.1| 67003 g12073 i0 88.793 78.528 232 24 92 2 21 250 4862 5093 Trypanosoma theileri YMG-11 genes for 18S rRNA, ITS1, 5.8S rRNA, ITS2, 28S rRNA, ITS3, ITS4, ITS5, partial and complete sequence blastn 19632 283 1 Eukaryota Discoba   Euglenozoa Kinetoplastea Trypanosomatida Trypanosomatidae Trypanosoma Trypanosoma theileri
21470903 21470903 PRJNA326068_P_NODE_14497_length_226_cov_2.578680_g13534_i0 PRJNA326068 14497 226 2.57868 5.8278168 Kinetoplastea 5653 Euglenozoa other_Eukaryota 185 1.9e-42   NTclustered gi|300676736|gb|GQ377697.1| 75058 g13534 i0 93.548 87.0221238938053 124 8 55 0 100 223 1087 964 Bodo saltans alpha-tubulin-like (Atub) mRNA, partial sequence blastn 19667 185 1 Eukaryota Discoba   Euglenozoa Kinetoplastea Eubodonida Bodonidae Bodo Bodo saltans
30881727 30881727 PRJNA326068_P_NODE_8194_length_366_cov_2.836795_g7246_i0 PRJNA326068 8194 366 2.836795 10.3826697 Eukaryota 2759 unresolved_Eukaryota other_Eukaryota 123 1.03e-33   NR KAJ9469984.1 91374 g7246 i0 55.5 1.77868852459016 110 44 86.1 2 362 48 5 114 KAJ9469984.1 hypothetical protein DIPPA_35953 [Diplonema papillatum] diamond 651 123 1 Eukaryota Discoba   Euglenozoa Diplonemea   Diplonemidae Diplonema Diplonema papillatum

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;