RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA326068", tax_clade = "CRuMs" and tax_superkingdom = "Eukaryota"

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tax_superkingdom 1

  • Eukaryota · 2 ✖

tax_clade 1

  • CRuMs · 2 ✖

bioproject 1

  • PRJNA326068 · 2 ✖

analysis 1

tax_phylum 0

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
8042731 8042731 PRJNA326068_P_NODE_7387_length_391_cov_2.964088_g6452_i0 PRJNA326068 7387 391 2.964088 11.58958408 Rigifila ramosa 1122280 Root_unresolved Root_unresolved 110 2.19e-19   NTclustered gi|390124887|dbj|AB686267.1| 1122280 g6452 i0 100 14.8312020460358 59 0 15 0 333 391 404 346 Rigifila ramosa gene for large subunit ribosomal RNA, partial sequence, strain: YPF923 blastn 5799 110 1 Eukaryota CRuMs       Rigifilida   Rigifila Rigifila ramosa
9317447 9317447 PRJNA326068_P_NODE_14628_length_224_cov_7.020513_g13665_i0 PRJNA326068 14628 224 7.020513 15.72594912 Rigifila ramosa 1122280 Root_unresolved Root_unresolved 91.6 4.22e-14   NTclustered gi|390124887|dbj|AB686267.1| 1122280 g13665 i0 91.176 20.7276785714286 68 5 48 1 1 68 1738 1672 Rigifila ramosa gene for large subunit ribosomal RNA, partial sequence, strain: YPF923 blastn 4643 91.6 1 Eukaryota CRuMs       Rigifilida   Rigifila Rigifila ramosa

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;