RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA322517" and tax_phylum = "Myxococcota"

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tax_superkingdom 1

tax_phylum 1

  • Myxococcota · 2 ✖

tax_kingdom 1

bioproject 1

  • PRJNA322517 · 2 ✖

analysis 1

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
27074560 27074560 PRJNA322517_P_NODE_3642_length_210_cov_3.975155_g3620_i0 PRJNA322517 3642 210 3.975155 8.3478255 Deltaproteobacteria bacterium 2026735 Bacteria Bacteria 68.6 1.83e-11   NR MEP6866604.1 2026735 g3620 i0 47.8 4 69 35 97.1 1 206 3 256 324 MEP6866604.1 cobalamin-dependent protein [Deltaproteobacteria bacterium] diamond 840 68.6 1 Bacteria   Pseudomonadati Myxococcota Myxococcia       Deltaproteobacteria bacterium
29663627 29663627 PRJNA322517_P_NODE_5810_length_164_cov_1.469565_g5788_i0 PRJNA322517 5810 164 1.469565 2.4100866 Myxococcales bacterium 2026763 Bacteria Bacteria 42.4 0.00461   NR HBQ13286.1 2026763 g5788 i0 43.6 0.713414634146341 39 22 71.3 0 137 21 18 56 HBQ13286.1 fatty acid hydroxylase [Myxococcales bacterium] diamond 117 42.4 1 Bacteria   Pseudomonadati Myxococcota Myxococcia Myxococcales     Myxococcales bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;