contig_metadata
11 rows where bioproject = "PRJNA322517" and tax_phylum = "Actinomycetota"
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| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 389322 | 389322 | PRJNA322517_P_NODE_5081_length_172_cov_5.000000_g5059_i0 | PRJNA322517 | 5081 | 172 | 5 | 8.6 | Dietzia kunjamensis | 322509 | Bacteria | Bacteria | 318 | 1.2899999999999999e-82 | NTclustered | gi|2732850265|gb|CP155441.1| | 322509 | g5059 | i0 | 100 | 3 | 172 | 0 | 100 | 0 | 1 | 172 | 34163 | 34334 | Dietzia kunjamensis strain BIM B-2035 plasmid pDK2035-69, complete sequence | blastn | 516 | 318 | 1 | Bacteria | Bacillati | Actinomycetota | Actinomycetes | Mycobacteriales | Dietziaceae | Dietzia | Dietzia kunjamensis | ||
| 1664011 | 1664011 | PRJNA322517_P_NODE_4822_length_177_cov_2.726562_g4800_i0 | PRJNA322517 | 4822 | 177 | 2.726562 | 4.82601474 | Corynebacterium doosanense | 1121358 | Bacteria | Bacteria | 178 | 2.36e-40 | NTclustered | gi|697777148|gb|CP006764.1| | 558173 | g4800 | i0 | 85.227 | 35.6666666666667 | 176 | 22 | 98 | 4 | 4 | 177 | 1308829 | 1308656 | Corynebacterium doosanense CAU 212 = DSM 45436, complete genome | blastn | 6313 | 178 | 1 | Bacteria | Bacillati | Actinomycetota | Actinomycetes | Mycobacteriales | Corynebacteriaceae | Corynebacterium | Corynebacterium doosanense | ||
| 5492877 | 5492877 | PRJNA322517_P_NODE_6225_length_161_cov_2.125000_g6203_i0 | PRJNA322517 | 6225 | 161 | 2.125 | 3.42125 | Streptomyces sp. cg36 | 3238798 | Bacteria | Bacteria | 52.8 | 0.013 | NTclustered | gi|2784064359|gb|CP163520.1| | 3238798 | g6203 | i0 | 100 | 0.173913043478261 | 28 | 0 | 17 | 0 | 128 | 155 | 995425 | 995398 | Streptomyces sp. cg36 chromosome, complete genome | blastn | 28 | 52.8 | 1 | Bacteria | Bacillati | Actinomycetota | Actinomycetes | Kitasatosporales | Streptomycetaceae | Streptomyces | Streptomyces sp. cg36 | ||
| 9317279 | 9317279 | PRJNA322517_P_NODE_3648_length_210_cov_3.335404_g3626_i0 | PRJNA322517 | 3648 | 210 | 3.335404 | 7.0043484 | Janibacter cremeus | 1285192 | Bacteria | Bacteria | 117 | 6.44e-22 | NTclustered | gi|2467977479|gb|CP115184.1| | 1285192 | g3626 | i0 | 90 | 0.428571428571429 | 90 | 9 | 43 | 0 | 1 | 90 | 557107 | 557018 | Janibacter cremeus strain SCSIO 52865 chromosome, complete genome | blastn | 90 | 117 | 1 | Bacteria | Bacillati | Actinomycetota | Actinomycetes | Micrococcales | Intrasporangiaceae | Janibacter | Janibacter cremeus | ||
| 10592968 | 10592968 | PRJNA322517_P_NODE_4009_length_198_cov_3.442953_g3987_i0 | PRJNA322517 | 4009 | 198 | 3.442953 | 6.81704694 | Janibacter sp. CX7 | 2963431 | Bacteria | Bacteria | 244 | 2.64e-60 | NTclustered | gi|2274439729|gb|CP101464.1| | 2963431 | g3987 | i0 | 88.889 | 8.22727272727273 | 198 | 22 | 100 | 0 | 1 | 198 | 677926 | 678123 | Janibacter sp. CX7 chromosome, complete genome | blastn | 1629 | 244 | 1 | Bacteria | Bacillati | Actinomycetota | Actinomycetes | Micrococcales | Intrasporangiaceae | Janibacter | Janibacter sp. CX7 | ||
| 10593009 | 10593009 | PRJNA322517_P_NODE_5249_length_169_cov_2.083333_g5227_i0 | PRJNA322517 | 5249 | 169 | 2.083333 | 3.52083277 | Brevibacterium sp. CS2 | 2575923 | Bacteria | Bacteria | 307 | 2.73e-79 | NTclustered | gi|1638089728|gb|CP040020.1| | 2575923 | g5227 | i0 | 99.408 | 1.3905325443787 | 169 | 1 | 100 | 0 | 1 | 169 | 378108 | 378276 | Brevibacterium sp. CS2 chromosome, complete genome | blastn | 235 | 307 | 1 | Bacteria | Bacillati | Actinomycetota | Actinomycetes | Micrococcales | Brevibacteriaceae | Brevibacterium | Brevibacterium sp. CS2 | ||
| 23341192 | 23341192 | PRJNA322517_P_NODE_4319_length_188_cov_2.870504_g4297_i0 | PRJNA322517 | 4319 | 188 | 2.870504 | 5.39654752 | Janibacter limosus | 53458 | Bacteria | Bacteria | 204 | 4.2e-48 | NTclustered | gi|1578802915|gb|CP036164.1| | 53458 | g4297 | i0 | 86.813 | 7.53191489361702 | 182 | 24 | 97 | 0 | 1 | 182 | 107777 | 107596 | Janibacter limosus strain P3-3-X1 chromosome, complete genome | blastn | 1416 | 204 | 1 | Bacteria | Bacillati | Actinomycetota | Actinomycetes | Micrococcales | Intrasporangiaceae | Janibacter | Janibacter limosus | ||
| 24615401 | 24615401 | PRJNA322517_P_NODE_4780_length_178_cov_2.193798_g4758_i0 | PRJNA322517 | 4780 | 178 | 2.193798 | 3.90496044 | Corynebacterium durum | 61592 | Bacteria | Bacteria | 296 | 6.3e-76 | NTclustered | gi|2531279924|gb|CP047200.1| | 61592 | g4758 | i0 | 96.629 | 1 | 178 | 6 | 100 | 0 | 1 | 178 | 224718 | 224895 | Corynebacterium durum strain DSM 45333 chromosome, complete genome | blastn | 178 | 296 | 1 | Bacteria | Bacillati | Actinomycetota | Actinomycetes | Mycobacteriales | Corynebacteriaceae | Corynebacterium | Corynebacterium durum | ||
| 27895759 | 27895759 | PRJNA322517_P_NODE_4585_length_183_cov_1.007463_g4563_i0 | PRJNA322517 | 4585 | 183 | 1.007463 | 1.84365729 | Nesterenkonia cremea | 1882340 | Bacteria | Bacteria | 132 | 5.11e-35 | NR | WP_229658688.1 | 1882340 | g4563 | i0 | 98.3 | 0.983606557377049 | 60 | 1 | 98.4 | 0 | 181 | 2 | 156 | 215 | WP_229658688.1 extracellular solute-binding protein [Nesterenkonia cremea] | diamond | 180 | 132 | 1 | Bacteria | Bacillati | Actinomycetota | Actinomycetes | Micrococcales | Micrococcaceae | Nesterenkonia | Nesterenkonia cremea | ||
| 28734145 | 28734145 | PRJNA322517_P_NODE_3427_length_223_cov_1.172414_g3405_i0 | PRJNA322517 | 3427 | 223 | 1.172414 | 2.61448322 | Actinomycetota | 201174 | Bacteria | Bacteria | 42.4 | 0.0404 | NR | WP_344774255.1 | 993084 | g3405 | i0 | 39.1 | 1.26457399103139 | 46 | 27 | 61.9 | 1 | 32 | 169 | 447 | 491 | WP_344774255.1 ArnT family glycosyltransferase [Gryllotalpicola kribbensis] | diamond | 282 | 42.4 | 1 | Bacteria | Bacillati | Actinomycetota | Actinomycetes | Micrococcales | Microbacteriaceae | Gryllotalpicola | Gryllotalpicola kribbensis | ||
| 31971129 | 31971129 | PRJNA322517_P_NODE_4958_length_175_cov_1.214286_g4936_i0 | PRJNA322517 | 4958 | 175 | 1.214286 | 2.1250005 | Candidatus Nanopelagicales bacterium | 2518612 | Bacteria | Bacteria | 56.2 | 2.45e-7 | NR | MDC1474477.1 | 2518612 | g4936 | i0 | 57.1 | 2.58857142857143 | 49 | 21 | 84 | 0 | 173 | 27 | 1 | 49 | MDC1474477.1 hypothetical protein [Candidatus Nanopelagicales bacterium] | diamond | 453 | 56.2 | 1 | Bacteria | Bacillati | Actinomycetota | Actinomycetes | Candidatus Nanopelagicales | Candidatus Nanopelagicales bacterium |
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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;