RNAquarium Metadata Server
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contig_metadata

1 row where bioproject = "PRJNA322517" and tax_clade = "Haptista"

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tax_superkingdom 1

tax_phylum 1

tax_clade 1

  • Haptista · 1 ✖

bioproject 1

  • PRJNA322517 · 1 ✖

analysis 1

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
32824249 32824249 PRJNA322517_P_NODE_1360_length_424_cov_1.224000_g1338_i0 PRJNA322517 1360 424 1.224 5.18976 Prymnesium parvum 97485 Haptophyta other_Eukaryota 173 1.86e-47   NR KAL1496763.1 97485 g1338 i0 60.6 0.969339622641509 137 54 96.9 0 412 2 23 159 KAL1496763.1 hypothetical protein AB1Y20_014353 [Prymnesium parvum] diamond 411 173 1 Eukaryota Haptista   Haptophyta   Prymnesiales Prymnesiaceae Prymnesium Prymnesium parvum

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;