RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA322517" and tax_clade = "Bacteria candidate phyla"

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tax_superkingdom 1

tax_clade 1

  • Bacteria candidate phyla · 2 ✖

bioproject 1

  • PRJNA322517 · 2 ✖

analysis 1

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
26631455 26631455 PRJNA322517_P_NODE_5321_length_168_cov_1.428571_g5299_i0 PRJNA322517 5321 168 1.428571 2.39999928 Candidatus Tayloriibacteriota bacterium 2052153 Bacteria Bacteria 75.9 5.7e-16   NR MDB5204031.1 2052153 g5299 i0 83.7 0.767857142857143 43 7 76.8 0 131 3 1 43 MDB5204031.1 hypothetical protein [Candidatus Taylorbacteria bacterium] diamond 129 75.9 1 Bacteria Bacteria candidate phyla   Candidatus Tayloriibacteriota         Candidatus Tayloriibacteriota bacterium
30137389 30137389 PRJNA322517_P_NODE_5912_length_164_cov_0.886957_g5890_i0 PRJNA322517 5912 164 0.886957 1.45460948 Candidatus Taylorbacteria bacterium RIFCSPHIGHO2_ 1802312 Bacteria Bacteria 70.1 2.74e-13   NR OHA26182.1 1802312 g5890 i0 64.8 0.98780487804878 54 19 98.8 0 164 3 28 81 OHA26182.1 MAG: crossover junction endodeoxyribonuclease RuvC [Candidatus Taylorbacteria bacterium RIFCSPHIGHO2_02_FULL_46_13] diamond 162 70.1 1 Bacteria Bacteria candidate phyla   Candidatus Tayloriibacteriota         Candidatus Taylorbacteria bacterium RIFCSPHIGHO2_02_FULL_46_13

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;