RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA316313" and tax_phylum = "Thermoproteota"

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tax_superkingdom 1

tax_phylum 1

  • Thermoproteota · 2 ✖

tax_kingdom 1

bioproject 1

  • PRJNA316313 · 2 ✖

analysis 1

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
28559031 28559031 PRJNA316313_P_NODE_418967_length_151_cov_5.035088_g417581_i0 PRJNA316313 418967 151 5.035088 7.60298288 Zestosphaera sp. 2303494 Archaea Archaea 51.6 7.9e-6   NR MFN3268367.1 2303494 g417581 i0 100 0.47682119205298 24 0 47.7 0 147 76 78 101 MFN3268367.1 RNA-guided endonuclease InsQ/TnpB family protein [Zestosphaera sp.] diamond 72 51.6 1 Archaea   Thermoproteati Thermoproteota Thermoprotei Desulfurococcales Desulfurococcaceae Zestosphaera Zestosphaera sp.
29853422 29853422 PRJNA316313_P_NODE_109531_length_198_cov_5.186335_g108145_i0 PRJNA316313 109531 198 5.186335 10.2689433 Zestosphaera sp. 2303494 Archaea Archaea 79.7 1.65e-15   NR MFN3268367.1 2303494 g108145 i0 97.5 0.606060606060606 40 1 60.6 0 196 77 391 430 MFN3268367.1 RNA-guided endonuclease InsQ/TnpB family protein [Zestosphaera sp.] diamond 120 79.7 1 Archaea   Thermoproteati Thermoproteota Thermoprotei Desulfurococcales Desulfurococcaceae Zestosphaera Zestosphaera sp.

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;