RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA316313", tax_phylum = "Lenarviricota" and tax_superkingdom = "Viruses"

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tax_superkingdom 1

  • Viruses · 2 ✖

tax_phylum 1

  • Lenarviricota · 2 ✖

tax_kingdom 1

bioproject 1

  • PRJNA316313 · 2 ✖

analysis 1

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
1067278 1067278 PRJNA316313_P_NODE_109061_length_199_cov_2.222222_g107675_i0 PRJNA316313 109061 199 2.222222 4.42222178 Orthornavirae 2732396 Viruses Viruses 56.5 0.001   NTclustered gi|2183423903|gb|MZ679790.1| 2027243 g107675 i0 100 5.25628140703518 30 0 15 0 1 30 3164 3193 MAG: Leviviridae sp. isolate R28-k141_67620 genomic sequence blastn 1046 56.5 1 Viruses   Orthornavirae Lenarviricota Leviviricetes Norzivirales Fiersviridae   Leviviridae sp.
1660650 1660650 PRJNA316313_P_NODE_1062_length_2524_cov_3223.339767_g366_i1 PRJNA316313 1062 2524 3223.339767 81357.09571908 Narnavirus saccharominor 3431059 Viruses Viruses 4536 0   NTclustered gi|21557564|ref|NC_004051.1| 186772 g366 i1 99.44 4.9377971473851 2498 14 100 0 27 2524 1 2498 Saccharomyces 20S RNA narnavirus, complete genome blastn 12463 4536 1 Viruses   Orthornavirae Lenarviricota Amabiliviricetes Wolframvirales Narnaviridae Narnavirus Narnavirus saccharominor

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;