RNAquarium Metadata Server
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contig_metadata

3 rows where bioproject = "PRJNA316313", tax_kingdom = "Orthornavirae" and tax_phylum = "Duplornaviricota"

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tax_superkingdom 1

tax_phylum 1

  • Duplornaviricota · 3 ✖

tax_kingdom 1

  • Orthornavirae · 3 ✖

bioproject 1

  • PRJNA316313 · 3 ✖

analysis 1

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
4213402 4213402 PRJNA316313_P_NODE_1224_length_2312_cov_30.975824_g888_i0 PRJNA316313 1224 2312 30.975824 716.16105088 Totivirus ni 3432954 Viruses Viruses 4248 0   NTclustered gi|9627980|ref|NC_001641.1| 42478 g888 i0 99.827 3.6219723183391 2312 4 100 0 1 2312 37 2348 Saccharomyces cerevisiae virus L-BC (La), complete genome blastn 8374 4248 1 Viruses   Orthornavirae Duplornaviricota Chrymotiviricetes Ghabrivirales Orthototiviridae Totivirus Totivirus ni
4213674 4213674 PRJNA316313_P_NODE_1724_length_1797_cov_60.982955_g1299_i0 PRJNA316313 1724 1797 60.982955 1095.86370135 Totivirus ni 3432954 Viruses Viruses 3236 0   NTclustered gi|9627980|ref|NC_001641.1| 42478 g1299 i0 99.165 4.28825820812465 1797 15 100 0 1 1797 4118 2322 Saccharomyces cerevisiae virus L-BC (La), complete genome blastn 7706 3236 1 Viruses   Orthornavirae Duplornaviricota Chrymotiviricetes Ghabrivirales Orthototiviridae Totivirus Totivirus ni
5489498 5489498 PRJNA316313_P_NODE_10365_length_523_cov_177.448560_g9121_i0 PRJNA316313 10365 523 177.44856 928.0559688 Totivirus ni 3432954 Viruses Viruses 900 0   NTclustered gi|9627980|ref|NC_001641.1| 42478 g9121 i0 97.71 4.56214149139579 524 10 100 2 1 523 4614 4092 Saccharomyces cerevisiae virus L-BC (La), complete genome blastn 2386 900 1 Viruses   Orthornavirae Duplornaviricota Chrymotiviricetes Ghabrivirales Orthototiviridae Totivirus Totivirus ni

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;