RNAquarium Metadata Server
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contig_metadata

3 rows where bioproject = "PRJNA316313", tax_kingdom = "Loebvirae" and tax_superkingdom = "Viruses"

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analysis 2

tax_superkingdom 1

  • Viruses · 3 ✖

tax_phylum 1

tax_kingdom 1

  • Loebvirae · 3 ✖

bioproject 1

  • PRJNA316313 · 3 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
23340051 23340051 PRJNA316313_P_NODE_480639_length_150_cov_6.238938_g479253_i0 PRJNA316313 480639 150 6.238938 9.358407 Inoviridae sp. 2219103 Viruses Viruses 137 3.28e-28   NTclustered gi|2059842810|tpg|BK040365.1| 2219103 g479253 i0 98.701 4.04 77 1 100 0 1 77 11036 11112 MAG TPA_asm: Inoviridae sp. isolate ct1wt16, partial genome blastn 606 137 1 Viruses   Loebvirae Hofneiviricota Faserviricetes Tubulavirales Inoviridae   Inoviridae sp.
27074551 27074551 PRJNA316313_P_NODE_86522_length_216_cov_4.340782_g85136_i0 PRJNA316313 86522 216 4.340782 9.37608912 Tubulavirales sp. 2833306 Viruses Viruses 105 1.32e-25   NR XOF02936.1 2833306 g85136 i0 75.7 0.972222222222222 70 17 97.2 0 6 215 78 147 XOF02936.1 MAG: rolling circle DNA replication initiation [Tubulavirales sp.] diamond 210 105 1 Viruses   Loebvirae Hofneiviricota Faserviricetes Tubulavirales     Tubulavirales sp.
28811138 28811138 PRJNA316313_P_NODE_506988_length_150_cov_3.000000_g505602_i0 PRJNA316313 506988 150 3 4.5 Inoviridae sp. 2219103 Viruses Viruses 49.7 3.63e-5   NR AXH73182.1 2219103 g505602 i0 84.6 0.52 26 4 52 0 2 79 411 436 AXH73182.1 MAG: zonular occludens toxin [Inoviridae sp.] diamond 78 49.7 1 Viruses   Loebvirae Hofneiviricota Faserviricetes Tubulavirales Inoviridae   Inoviridae sp.

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;