RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA316313", tax_clade = "Nitrospinota/Tectimicrobiota group" and tax_superkingdom = "Bacteria"

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tax_superkingdom 1

  • Bacteria · 2 ✖

tax_kingdom 1

tax_clade 1

  • Nitrospinota/Tectimicrobiota group · 2 ✖

bioproject 1

  • PRJNA316313 · 2 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
30990901 30990901 PRJNA316313_P_NODE_199494_length_187_cov_3.453333_g198108_i0 PRJNA316313 199494 187 3.453333 6.45773271 Nitrospinota bacterium 2026769 Bacteria Bacteria 51.2 1.77e-5   NR HIJ51267.1 2026769 g198108 i0 87.5 0.385026737967914 24 3 38.5 0 4 75 92 115 HIJ51267.1 hypothetical protein [Nitrospinota bacterium] diamond 72 51.2 1 Bacteria Nitrospinota/Tectimicrobiota group Pseudomonadati Nitrospinota         Nitrospinota bacterium
31577365 31577365 PRJNA316313_P_NODE_322636_length_187_cov_2.193333_g321250_i0 PRJNA316313 322636 187 2.193333 4.10153271 Candidatus Entotheonella 93171 Bacteria Bacteria 42.7 0.0177   NR HEY7710212.1 2066855 g321250 i0 40 2.80748663101604 60 32 89.8 1 186 19 289 348 HEY7710212.1 hypothetical protein [Candidatus Entotheonella sp.] diamond 525 42.7 1 Bacteria Nitrospinota/Tectimicrobiota group Pseudomonadati Candidatus Tectimicrobiota Candidatus Entotheonellia Candidatus Entotheonellales Candidatus Entotheonellaceae Candidatus Entotheonella Candidatus Entotheonella sp.

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;