RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA316313", tax_clade = "Metamonada" and tax_superkingdom = "Eukaryota"

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tax_superkingdom 1

  • Eukaryota · 2 ✖

tax_phylum 1

tax_clade 1

  • Metamonada · 2 ✖

bioproject 1

  • PRJNA316313 · 2 ✖

analysis 1

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
5492320 5492320 PRJNA316313_S_NODE_1745_length_174_cov_3.532847_g1742_i0 PRJNA316313 1745 174 3.532847 6.14715378 Monocercomonoides exilis 2049356 Preaxostyla other_Eukaryota 115 1.84e-21   NTclustered gi|2794954618|ref|XM_067872953.1| 2049356 g1742 i0 84.615 7.04022988505747 117 16 67 2 1 116 1124 1239 Monocercomonoides exilis conventional actin (MONOS_2989), mRNA blastn 1225 115 1 Eukaryota Metamonada   Preaxostyla   Oxymonadida Polymastigidae Monocercomonoides Monocercomonoides exilis
16963607 16963607 PRJNA316313_P_NODE_151394_length_187_cov_4.626667_g150008_i0 PRJNA316313 151394 187 4.626667 8.65186729 Monocercomonoides exilis 2049356 Preaxostyla other_Eukaryota 56.5 0.001   NTclustered gi|2794969719|ref|XM_067876929.1| 2049356 g150008 i0 96.97 0.989304812834225 33 1 18 0 18 50 2652 2620 Monocercomonoides exilis putative Calcineurin-like phosphoesterase (MONOS_6680fu6681), partial mRNA blastn 185 56.5 1 Eukaryota Metamonada   Preaxostyla   Oxymonadida Polymastigidae Monocercomonoides Monocercomonoides exilis

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;