RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA316313", tax_clade = "FCB group" and tax_phylum = "Candidatus Cloacimonadota"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Candidatus Cloacimonadota · 2 ✖

tax_kingdom 1

tax_clade 1

  • FCB group · 2 ✖

bioproject 1

  • PRJNA316313 · 2 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
23339285 23339285 PRJNA316313_P_NODE_350979_length_178_cov_3.148936_g349593_i0 PRJNA316313 350979 178 3.148936 5.60510608 Candidatus Cloacimonadales bacterium 3060593 Bacteria Bacteria 89.8 1.15e-13   NTclustered gi|2621703325|emb|OY762463.1| 3060593 g349593 i0 96.296 0.303370786516854 54 2 30 0 125 178 1931552 1931605 MAG: Candidatus Cloacimonadales bacterium isolate 65c66405-a38e-4cb1-a3a4-7640fae4a1c6 genome assembly, chromosome: 1 blastn 54 89.8 1 Bacteria FCB group Pseudomonadati Candidatus Cloacimonadota Candidatus Cloacimonadia Candidatus Cloacimonadales     Candidatus Cloacimonadales bacterium
27042901 27042901 PRJNA316313_P_NODE_30782_length_311_cov_3.602190_g29401_i0 PRJNA316313 30782 311 3.60219 11.2028109 Candidatus Cloacimonas sp. 2053534 Bacteria Bacteria 63.9 2.98e-9   NR MEN6446019.1 2053534 g29401 i0 61.7 1.87138263665595 47 18 45.3 0 311 171 72 118 MEN6446019.1 SBBP repeat-containing protein [Candidatus Cloacimonas sp.] diamond 582 63.9 1 Bacteria FCB group Pseudomonadati Candidatus Cloacimonadota Candidatus Cloacimonadia Candidatus Cloacimonadales Candidatus Cloacimonadaceae Candidatus Cloacimonas Candidatus Cloacimonas sp.

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;